Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops6g00415 | ATGGCAGCAGAAGAAGTGGGTGGAGAAGATATTGTGAGGTCAGTGAGTGATGGAAGAAGGAAGAGTTTTGGGGAGTATATCTCAGCAAGCTTGGATGAAGCTGTTGGTGATGTGTTTCAGAGAAGTGAAAGGGAAATAGATGAAGAGGAGGAGCTGAGGTGGGCAGCTTTGGAGAGGCTTCCAACATATGATAGGATGAGGAAAGGGATTTTGAAGCAAGTTCTAGATAATGGGAGAGTTAACTATGAAGAGGTTGACATCACCAAGCTTGGAGTGCAGGAAAAGAAGCAACTCCTTGAGAGCATAATAAAGACTGTTGAAGAAGACAATGAGAATTTTCTCCATAGGATGAGGGACAGGATTGATAGGGTTGGAATTGAGATCCCCAAGATTGAAGTTCGGTTTGAGCATTTATCAGTTGAAGGGGATGCATATGTTGGAACCAGGGCCTTGCCAACTCTACTCAATTCTACCCTGAATGTAATAGAGGGACTTTTGGAACATATCAAGCTTTTTCCATTGAAGAAAAGGGTTGTCAATATTCTAAAAGGTGTCAGTGGAATTGTGAAACCATCAAGAATGACTTTGCTTTTGGGACCTCCAGGGTCAGGAAAAACTACACTCCTCCAGGCACTTGCCGGAAAAATGGACAAGGATCTAAGGGTATCAGGAAGAGTGACTTACTGTGGTCATGAATTGTCAGAGTTTGTTCCTCAAAGAACATGTGCTTATATAAGTCAGCATGATCTTCACCATGGAGAAATGACAGTGAGAGAGACGCTGGACTTCTCTGGACGCTGCTTGGGAGTTGGAACAAGGTATGATCTGCTGACAGAATTGTCAAGAAGAGAACTAGCAGCAGGTATTAAACCAGATCCTGAGATAGATGCTTTCATGAAAGCAACAGCAATGGAAGGTCAAGAAACAAGTCTTGTCACAGATTATATTCTCAAGATTCTTGGATTGGAAATATGTGCTGATATTTTGGTGGGAGATGAGATGAGAAGGGGCATATCTGGTGGACAAAAGAAGCGTTTAACAACTGGTGAGATGTTGGTAGGACCTGCAAAAGCCCTCTTTATGGATGGAATTTCAACTGGTTTGGATAGTTCCACGACCTTCCAAATAGTAAGATTTATGAGGCAGATGGTCCATATCATGGACGTTACTATGATAATCTCTCTTCTGCAACCTGCTCCAGAAACATATAACCTTTTTGATGACATAATGTTACTTTCAGAAGGTAAGATTGTCTATCAAGGTCCCCGTGAGAGGGTTCTAGATTTTTTTGAAAGTGTGGGCTTCAAATGCCCAGGAAGGAAAGGAGTTGCAGACTTTTTACAAGAGGTAACTTCCAGAAAGGACCAAGAACAGTACTGGTTCAGAAGGGACATACCTTACCAATATGTTAGTGTGCCTGAGTTTGTAGCCCACTTCAACAATTACAGCATTGGTCGACAACTTAATGAAGAGATTCAAGTTCCATTTGATCCTAATAAAACCCATCGTGCTGCATTAGTAAAGGGAAAGTATGGAATCTCCAAATGGGAACTCTTCAAGGCATGCTTTTCAAGAGAGTGGCTATTGATGAAGCGCAACTATTTTGTGTATATATTTAAGACTTTTCAGATAGCTATCGTATCTATAATTACCATGACAGTATATTTTAGAACAGAAATGAAGCATGGTCAACTTGAAGATGGAGGAAAATATTATGGTGCACTATTTTTCAGCCTTATCAATGTAATGTTCAATGGAGTGGCAGAGCTTGCAATGACTATTAATAGACTTCCTGTTTTCTTCAAGCAGAGAGATTTCCTTTTCTATCCAGCATGGGCTTTTGCATTGCCCATCTGGGTTCTCAGAGTTCCTCTCTCTCTGTTGGAGTCAGGATTATGGATCATCCTCACTTATTATACTATCGGCTTTGCTCCTGCAGCTAGTAGGTTTTTTCGTCAATTATTGGCATTCTTTTGCGTGAATCAAATGGCTCTATCCCTTTTCCGCTTTATTGCTGCACTTGGAAGAACAAAAGTTGTGGCAAACACACTTGCTGTGTTCACAATTTTAGTTGTTTTTGTCCTAAGTGGAGTTACTATTTCAAGAGATGATCTTGAACCATGGATGATATGGTGCTATTATGTTTCCCCTATGATGTATGGACAGAACGCAATAGCCATCAATGAGTTCTTAGACAAAAGATGGAGTTCTCCTAATAATGACCCAAGAATTCATGAGCCCACAGTTGGGAAGGCTTTCCTTAAGGCCAGAGGCATATTTACAGAAGACTATTGGTACTGGATATCTGTCGGTGTACTTATAGGATTTTCTCTGCTTTTCAACACTTGTTTCATTCTCTCTCTAACTTATTTGAATCCATTTGGAAGCTCTAAATCTATTATAGTGGAAGAGGAAGACAAAAGTAAGAACATAACTGCATCCTCCTCAGTGGAAAAAACGGCAACAGCAATTACAGAGAAGAATTCAGCTTCAAATGCTAAAAGGCTTGAAGGTATTGATATGGAAGTAAGAAACACCACACATAGCTCAATTCCTAAAGCTGCAGAGAATGCAAAATCCAAGAAGGGAATGGTGTTGCCCTTTCAGCCTCTGTCACTTGCTTTTGAAGAAGTGAATTATTACATTGATATGCCAAATGAAATGAAGAAACAAGGATTTGAAGAGAATAGACTCCAACTACTAAGAGATATAAGTGGTGCTTTCAGGCCTGGAATTTTGACAGCATTAGTTGGTGTAAGTGGTGCTGGAAAAACCACCTTGATGGATGTGCTTGCAGGAAGGAAAACCAGTGGTTATATTGAGGGAAGCATCAGCATATCTGGTTATCCAAAGAACCAAGCAAATTTTGCTCGGATTAGTGGTTATTGTGAACAAAATGATATCCATTCTCCAAATGTTACGGTCTATGAATCTCTTCTGTTCTCTGCTTGGCTGCGTCTTAGTAGGGAGGTTGATAAAGAAACACGAAAGATGTTTATTGAGGAAGTTATAGAGCTGGTCGAGCTACATCCGGTAAGGAATTTTATAGTAGGCCTTCCTGGAATAGATGGCTTATCAACTGAGCAGAGAAAGAGGCTTACCATTGCTGTAGAATTGGTTGCAAATCCTTCCATTATTTTTATGGATGAGCCAACAACTGGTCTTGATGCTAGAGCAGCAGCAGTTGTTATGCGTACTGTTAGAAATACAGTAGATACAGGGCGAACTGTTGTCTGCACTATTCATCAACCAAGCATTGATATCTTTGAAGATTTTGATGAGCTGCTACTGATGAAGAGAGGGGGACAAGTGATATATGGTGGTCCTCTTGGTCGAAACTCAGAGAAGCTTATAGAGTACTTTGAGGCTTTTCCAGGAATTCCAAAGATTAAAGATGGATATAATCCAGCCACATGGATGCTGGAGATCAGTTCTCCAGTAGTTGAGTCTCAGCTTGATATAGACTTTGCAGAATTATACACTAAGTCAGACCTTTACCAAAAGAACCAGGAACTTATTAAGGAACTATGCACCCCGGTACCTGGAACAAAGGACCTTTACTTTCCATCTAAATACTCCCAATCATTTGTTACTCAATGCAAAGCTTGCTTCTGGAAACAGCACTGCTCCTATTGGAGGAATCCACAATACAATGCCATCAGATTCTTCATCACAATATTTATTGGTGTCATGTTTGGACTTATTTATTGGAACAAGGGAGATAAGACACAAAAGGAACAAGACCTGTTGAATCTCCTTGGAGCTATGTATTCTTCGGTTATTTTCCTTGGAGCCTCCAACACTAACAGTGTGCAACCTGTTGTTGCAATAGAAAGAACAGTTCTCTACCGTGAAAGAGCTGCTGGAATGTACTCAGAACTGCCTTATGCAATTGGTCAGGTAGCAATTGAAGTAATTTATGTTGCAATCCAAAGTCTAGCCTATTCCATTATCCTCTACTGGATGATTGGGTTTCAACCTGAAGTTGAAAATTTCTTGTGGTTCTACTACTTCATATTCATGTCCTTTATGTACTTCACACTGTACGGAATGATGACTGTAGCTCTGACACCAAACTACCAAATTGCTGCAATCGTTATGTCTTTTTTCATCAGTTTCTGGAACCTGTTCTCTGGTTTCCTTATCCCAAGAACGCAAATTCCTATATGGTGGAGGTGGTATTATTGGGCTTCCCCTGTGTCATGGACTATATATGGATTGGTGACATCTCAGGTGGGTGACAAGAACAGTCCAATAGAGGTCCCTGGCTTCAGACCCATGACAGTAAGAGATTACCTTGAGAGGCAGTTGGGCTTTGAGCATGACTTCCTTGGAGTTGTTGCTTTGGTTCACATTGCATTTTGCCTCCTCTTCCTTTTTGTATATGCATATGGCATCAAGTTCTTAAATTTCCAGAAAAGATAA | 4425 | 0.405 | MAAEEVGGEDIVRSVSDGRRKSFGEYISASLDEAVGDVFQRSEREIDEEEELRWAALERLPTYDRMRKGILKQVLDNGRVNYEEVDITKLGVQEKKQLLESIIKTVEEDNENFLHRMRDRIDRVGIEIPKIEVRFEHLSVEGDAYVGTRALPTLLNSTLNVIEGLLEHIKLFPLKKRVVNILKGVSGIVKPSRMTLLLGPPGSGKTTLLQALAGKMDKDLRVSGRVTYCGHELSEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYDLLTELSRRELAAGIKPDPEIDAFMKATAMEGQETSLVTDYILKILGLEICADILVGDEMRRGISGGQKKRLTTGEMLVGPAKALFMDGISTGLDSSTTFQIVRFMRQMVHIMDVTMIISLLQPAPETYNLFDDIMLLSEGKIVYQGPRERVLDFFESVGFKCPGRKGVADFLQEVTSRKDQEQYWFRRDIPYQYVSVPEFVAHFNNYSIGRQLNEEIQVPFDPNKTHRAALVKGKYGISKWELFKACFSREWLLMKRNYFVYIFKTFQIAIVSIITMTVYFRTEMKHGQLEDGGKYYGALFFSLINVMFNGVAELAMTINRLPVFFKQRDFLFYPAWAFALPIWVLRVPLSLLESGLWIILTYYTIGFAPAASRFFRQLLAFFCVNQMALSLFRFIAALGRTKVVANTLAVFTILVVFVLSGVTISRDDLEPWMIWCYYVSPMMYGQNAIAINEFLDKRWSSPNNDPRIHEPTVGKAFLKARGIFTEDYWYWISVGVLIGFSLLFNTCFILSLTYLNPFGSSKSIIVEEEDKSKNITASSSVEKTATAITEKNSASNAKRLEGIDMEVRNTTHSSIPKAAENAKSKKGMVLPFQPLSLAFEEVNYYIDMPNEMKKQGFEENRLQLLRDISGAFRPGILTALVGVSGAGKTTLMDVLAGRKTSGYIEGSISISGYPKNQANFARISGYCEQNDIHSPNVTVYESLLFSAWLRLSREVDKETRKMFIEEVIELVELHPVRNFIVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEDFDELLLMKRGGQVIYGGPLGRNSEKLIEYFEAFPGIPKIKDGYNPATWMLEISSPVVESQLDIDFAELYTKSDLYQKNQELIKELCTPVPGTKDLYFPSKYSQSFVTQCKACFWKQHCSYWRNPQYNAIRFFITIFIGVMFGLIYWNKGDKTQKEQDLLNLLGAMYSSVIFLGASNTNSVQPVVAIERTVLYRERAAGMYSELPYAIGQVAIEVIYVAIQSLAYSIILYWMIGFQPEVENFLWFYYFIFMSFMYFTLYGMMTVALTPNYQIAAIVMSFFISFWNLFSGFLIPRTQIPIWWRWYYWASPVSWTIYGLVTSQVGDKNSPIEVPGFRPMTVRDYLERQLGFEHDFLGVVALVHIAFCLLFLFVYAYGIKFLNFQKR* | 1475 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops6g00415 | 1474 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 896 | 1109 | IPR027417 | - | |
Rops6g00415 | 1474 | Pfam | ABC transporter | 182 | 362 | IPR003439 | GO:0005524 | |
Rops6g00415 | 1474 | Gene3D | - | 170 | 466 | IPR027417 | - | |
Rops6g00415 | 1474 | Pfam | Plant PDR ABC transporter associated | 735 | 801 | IPR013581 | - | |
Rops6g00415 | 1474 | Pfam | ABC-2 type transporter | 1082 | 1152 | IPR043926 | GO:0140359 | |
Rops6g00415 | 1474 | Pfam | ABC-2 type transporter | 397 | 450 | IPR043926 | GO:0140359 | |
Rops6g00415 | 1474 | Gene3D | - | 887 | 1120 | IPR027417 | - | |
Rops6g00415 | 1474 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 882 | 1125 | IPR003439 | GO:0005524 | |
Rops6g00415 | 1474 | SMART | AAA_5 | 910 | 1102 | IPR003593 | GO:0016887 | |
Rops6g00415 | 1474 | SMART | AAA_5 | 191 | 416 | IPR003593 | GO:0016887 | |
Rops6g00415 | 1474 | Pfam | ABC-transporter N-terminal | 107 | 156 | IPR029481 | - | |
Rops6g00415 | 1474 | CDD | ABCG_PDR_domain1 | 169 | 421 | IPR034001 | - | |
Rops6g00415 | 1474 | FunFam | ABC transporter G family member 34 | 169 | 473 | - | - | |
Rops6g00415 | 1474 | CDD | ABCG_PDR_domain2 | 870 | 1108 | IPR034003 | - | |
Rops6g00415 | 1474 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 179 | 437 | IPR027417 | - | |
Rops6g00415 | 1474 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 166 | 439 | IPR003439 | GO:0005524 | |
Rops6g00415 | 1474 | FunFam | ABC transporter G family member 40 | 887 | 1117 | - | - | |
Rops6g00415 | 1474 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 73 | 220 | IPR027417 | - | |
Rops6g00415 | 1474 | Pfam | ABC-2 type transporter | 518 | 730 | IPR013525 | GO:0016020|GO:0140359 | |
Rops6g00415 | 1474 | Pfam | ABC-2 type transporter | 1198 | 1410 | IPR013525 | GO:0016020|GO:0140359 | |
Rops6g00415 | 1474 | Pfam | ABC transporter | 901 | 1052 | IPR003439 | GO:0005524 | |
Rops6g00415 | 1474 | PANTHER | PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 | 31 | 1474 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops6g00415 | Rops-Chr6 | 10890103 | 10910235 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops6g00415 | 898 | 1085 | Calmodulin-binding Proteins | AT2G36910 | 27.723 | 4.99e-08 | 56.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops6g00415 | K08711 | - | gmx:100788067 | 2562.72 |