Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00415 ATGGCAGCAGAAGAAGTGGGTGGAGAAGATATTGTGAGGTCAGTGAGTGATGGAAGAAGGAAGAGTTTTGGGGAGTATATCTCAGCAAGCTTGGATGAAGCTGTTGGTGATGTGTTTCAGAGAAGTGAAAGGGAAATAGATGAAGAGGAGGAGCTGAGGTGGGCAGCTTTGGAGAGGCTTCCAACATATGATAGGATGAGGAAAGGGATTTTGAAGCAAGTTCTAGATAATGGGAGAGTTAACTATGAAGAGGTTGACATCACCAAGCTTGGAGTGCAGGAAAAGAAGCAACTCCTTGAGAGCATAATAAAGACTGTTGAAGAAGACAATGAGAATTTTCTCCATAGGATGAGGGACAGGATTGATAGGGTTGGAATTGAGATCCCCAAGATTGAAGTTCGGTTTGAGCATTTATCAGTTGAAGGGGATGCATATGTTGGAACCAGGGCCTTGCCAACTCTACTCAATTCTACCCTGAATGTAATAGAGGGACTTTTGGAACATATCAAGCTTTTTCCATTGAAGAAAAGGGTTGTCAATATTCTAAAAGGTGTCAGTGGAATTGTGAAACCATCAAGAATGACTTTGCTTTTGGGACCTCCAGGGTCAGGAAAAACTACACTCCTCCAGGCACTTGCCGGAAAAATGGACAAGGATCTAAGGGTATCAGGAAGAGTGACTTACTGTGGTCATGAATTGTCAGAGTTTGTTCCTCAAAGAACATGTGCTTATATAAGTCAGCATGATCTTCACCATGGAGAAATGACAGTGAGAGAGACGCTGGACTTCTCTGGACGCTGCTTGGGAGTTGGAACAAGGTATGATCTGCTGACAGAATTGTCAAGAAGAGAACTAGCAGCAGGTATTAAACCAGATCCTGAGATAGATGCTTTCATGAAAGCAACAGCAATGGAAGGTCAAGAAACAAGTCTTGTCACAGATTATATTCTCAAGATTCTTGGATTGGAAATATGTGCTGATATTTTGGTGGGAGATGAGATGAGAAGGGGCATATCTGGTGGACAAAAGAAGCGTTTAACAACTGGTGAGATGTTGGTAGGACCTGCAAAAGCCCTCTTTATGGATGGAATTTCAACTGGTTTGGATAGTTCCACGACCTTCCAAATAGTAAGATTTATGAGGCAGATGGTCCATATCATGGACGTTACTATGATAATCTCTCTTCTGCAACCTGCTCCAGAAACATATAACCTTTTTGATGACATAATGTTACTTTCAGAAGGTAAGATTGTCTATCAAGGTCCCCGTGAGAGGGTTCTAGATTTTTTTGAAAGTGTGGGCTTCAAATGCCCAGGAAGGAAAGGAGTTGCAGACTTTTTACAAGAGGTAACTTCCAGAAAGGACCAAGAACAGTACTGGTTCAGAAGGGACATACCTTACCAATATGTTAGTGTGCCTGAGTTTGTAGCCCACTTCAACAATTACAGCATTGGTCGACAACTTAATGAAGAGATTCAAGTTCCATTTGATCCTAATAAAACCCATCGTGCTGCATTAGTAAAGGGAAAGTATGGAATCTCCAAATGGGAACTCTTCAAGGCATGCTTTTCAAGAGAGTGGCTATTGATGAAGCGCAACTATTTTGTGTATATATTTAAGACTTTTCAGATAGCTATCGTATCTATAATTACCATGACAGTATATTTTAGAACAGAAATGAAGCATGGTCAACTTGAAGATGGAGGAAAATATTATGGTGCACTATTTTTCAGCCTTATCAATGTAATGTTCAATGGAGTGGCAGAGCTTGCAATGACTATTAATAGACTTCCTGTTTTCTTCAAGCAGAGAGATTTCCTTTTCTATCCAGCATGGGCTTTTGCATTGCCCATCTGGGTTCTCAGAGTTCCTCTCTCTCTGTTGGAGTCAGGATTATGGATCATCCTCACTTATTATACTATCGGCTTTGCTCCTGCAGCTAGTAGGTTTTTTCGTCAATTATTGGCATTCTTTTGCGTGAATCAAATGGCTCTATCCCTTTTCCGCTTTATTGCTGCACTTGGAAGAACAAAAGTTGTGGCAAACACACTTGCTGTGTTCACAATTTTAGTTGTTTTTGTCCTAAGTGGAGTTACTATTTCAAGAGATGATCTTGAACCATGGATGATATGGTGCTATTATGTTTCCCCTATGATGTATGGACAGAACGCAATAGCCATCAATGAGTTCTTAGACAAAAGATGGAGTTCTCCTAATAATGACCCAAGAATTCATGAGCCCACAGTTGGGAAGGCTTTCCTTAAGGCCAGAGGCATATTTACAGAAGACTATTGGTACTGGATATCTGTCGGTGTACTTATAGGATTTTCTCTGCTTTTCAACACTTGTTTCATTCTCTCTCTAACTTATTTGAATCCATTTGGAAGCTCTAAATCTATTATAGTGGAAGAGGAAGACAAAAGTAAGAACATAACTGCATCCTCCTCAGTGGAAAAAACGGCAACAGCAATTACAGAGAAGAATTCAGCTTCAAATGCTAAAAGGCTTGAAGGTATTGATATGGAAGTAAGAAACACCACACATAGCTCAATTCCTAAAGCTGCAGAGAATGCAAAATCCAAGAAGGGAATGGTGTTGCCCTTTCAGCCTCTGTCACTTGCTTTTGAAGAAGTGAATTATTACATTGATATGCCAAATGAAATGAAGAAACAAGGATTTGAAGAGAATAGACTCCAACTACTAAGAGATATAAGTGGTGCTTTCAGGCCTGGAATTTTGACAGCATTAGTTGGTGTAAGTGGTGCTGGAAAAACCACCTTGATGGATGTGCTTGCAGGAAGGAAAACCAGTGGTTATATTGAGGGAAGCATCAGCATATCTGGTTATCCAAAGAACCAAGCAAATTTTGCTCGGATTAGTGGTTATTGTGAACAAAATGATATCCATTCTCCAAATGTTACGGTCTATGAATCTCTTCTGTTCTCTGCTTGGCTGCGTCTTAGTAGGGAGGTTGATAAAGAAACACGAAAGATGTTTATTGAGGAAGTTATAGAGCTGGTCGAGCTACATCCGGTAAGGAATTTTATAGTAGGCCTTCCTGGAATAGATGGCTTATCAACTGAGCAGAGAAAGAGGCTTACCATTGCTGTAGAATTGGTTGCAAATCCTTCCATTATTTTTATGGATGAGCCAACAACTGGTCTTGATGCTAGAGCAGCAGCAGTTGTTATGCGTACTGTTAGAAATACAGTAGATACAGGGCGAACTGTTGTCTGCACTATTCATCAACCAAGCATTGATATCTTTGAAGATTTTGATGAGCTGCTACTGATGAAGAGAGGGGGACAAGTGATATATGGTGGTCCTCTTGGTCGAAACTCAGAGAAGCTTATAGAGTACTTTGAGGCTTTTCCAGGAATTCCAAAGATTAAAGATGGATATAATCCAGCCACATGGATGCTGGAGATCAGTTCTCCAGTAGTTGAGTCTCAGCTTGATATAGACTTTGCAGAATTATACACTAAGTCAGACCTTTACCAAAAGAACCAGGAACTTATTAAGGAACTATGCACCCCGGTACCTGGAACAAAGGACCTTTACTTTCCATCTAAATACTCCCAATCATTTGTTACTCAATGCAAAGCTTGCTTCTGGAAACAGCACTGCTCCTATTGGAGGAATCCACAATACAATGCCATCAGATTCTTCATCACAATATTTATTGGTGTCATGTTTGGACTTATTTATTGGAACAAGGGAGATAAGACACAAAAGGAACAAGACCTGTTGAATCTCCTTGGAGCTATGTATTCTTCGGTTATTTTCCTTGGAGCCTCCAACACTAACAGTGTGCAACCTGTTGTTGCAATAGAAAGAACAGTTCTCTACCGTGAAAGAGCTGCTGGAATGTACTCAGAACTGCCTTATGCAATTGGTCAGGTAGCAATTGAAGTAATTTATGTTGCAATCCAAAGTCTAGCCTATTCCATTATCCTCTACTGGATGATTGGGTTTCAACCTGAAGTTGAAAATTTCTTGTGGTTCTACTACTTCATATTCATGTCCTTTATGTACTTCACACTGTACGGAATGATGACTGTAGCTCTGACACCAAACTACCAAATTGCTGCAATCGTTATGTCTTTTTTCATCAGTTTCTGGAACCTGTTCTCTGGTTTCCTTATCCCAAGAACGCAAATTCCTATATGGTGGAGGTGGTATTATTGGGCTTCCCCTGTGTCATGGACTATATATGGATTGGTGACATCTCAGGTGGGTGACAAGAACAGTCCAATAGAGGTCCCTGGCTTCAGACCCATGACAGTAAGAGATTACCTTGAGAGGCAGTTGGGCTTTGAGCATGACTTCCTTGGAGTTGTTGCTTTGGTTCACATTGCATTTTGCCTCCTCTTCCTTTTTGTATATGCATATGGCATCAAGTTCTTAAATTTCCAGAAAAGATAA 4425 0.405 MAAEEVGGEDIVRSVSDGRRKSFGEYISASLDEAVGDVFQRSEREIDEEEELRWAALERLPTYDRMRKGILKQVLDNGRVNYEEVDITKLGVQEKKQLLESIIKTVEEDNENFLHRMRDRIDRVGIEIPKIEVRFEHLSVEGDAYVGTRALPTLLNSTLNVIEGLLEHIKLFPLKKRVVNILKGVSGIVKPSRMTLLLGPPGSGKTTLLQALAGKMDKDLRVSGRVTYCGHELSEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYDLLTELSRRELAAGIKPDPEIDAFMKATAMEGQETSLVTDYILKILGLEICADILVGDEMRRGISGGQKKRLTTGEMLVGPAKALFMDGISTGLDSSTTFQIVRFMRQMVHIMDVTMIISLLQPAPETYNLFDDIMLLSEGKIVYQGPRERVLDFFESVGFKCPGRKGVADFLQEVTSRKDQEQYWFRRDIPYQYVSVPEFVAHFNNYSIGRQLNEEIQVPFDPNKTHRAALVKGKYGISKWELFKACFSREWLLMKRNYFVYIFKTFQIAIVSIITMTVYFRTEMKHGQLEDGGKYYGALFFSLINVMFNGVAELAMTINRLPVFFKQRDFLFYPAWAFALPIWVLRVPLSLLESGLWIILTYYTIGFAPAASRFFRQLLAFFCVNQMALSLFRFIAALGRTKVVANTLAVFTILVVFVLSGVTISRDDLEPWMIWCYYVSPMMYGQNAIAINEFLDKRWSSPNNDPRIHEPTVGKAFLKARGIFTEDYWYWISVGVLIGFSLLFNTCFILSLTYLNPFGSSKSIIVEEEDKSKNITASSSVEKTATAITEKNSASNAKRLEGIDMEVRNTTHSSIPKAAENAKSKKGMVLPFQPLSLAFEEVNYYIDMPNEMKKQGFEENRLQLLRDISGAFRPGILTALVGVSGAGKTTLMDVLAGRKTSGYIEGSISISGYPKNQANFARISGYCEQNDIHSPNVTVYESLLFSAWLRLSREVDKETRKMFIEEVIELVELHPVRNFIVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFEDFDELLLMKRGGQVIYGGPLGRNSEKLIEYFEAFPGIPKIKDGYNPATWMLEISSPVVESQLDIDFAELYTKSDLYQKNQELIKELCTPVPGTKDLYFPSKYSQSFVTQCKACFWKQHCSYWRNPQYNAIRFFITIFIGVMFGLIYWNKGDKTQKEQDLLNLLGAMYSSVIFLGASNTNSVQPVVAIERTVLYRERAAGMYSELPYAIGQVAIEVIYVAIQSLAYSIILYWMIGFQPEVENFLWFYYFIFMSFMYFTLYGMMTVALTPNYQIAAIVMSFFISFWNLFSGFLIPRTQIPIWWRWYYWASPVSWTIYGLVTSQVGDKNSPIEVPGFRPMTVRDYLERQLGFEHDFLGVVALVHIAFCLLFLFVYAYGIKFLNFQKR* 1475
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00415 1474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 896 1109 IPR027417 -
Rops6g00415 1474 Pfam ABC transporter 182 362 IPR003439 GO:0005524
Rops6g00415 1474 Gene3D - 170 466 IPR027417 -
Rops6g00415 1474 Pfam Plant PDR ABC transporter associated 735 801 IPR013581 -
Rops6g00415 1474 Pfam ABC-2 type transporter 1082 1152 IPR043926 GO:0140359
Rops6g00415 1474 Pfam ABC-2 type transporter 397 450 IPR043926 GO:0140359
Rops6g00415 1474 Gene3D - 887 1120 IPR027417 -
Rops6g00415 1474 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 882 1125 IPR003439 GO:0005524
Rops6g00415 1474 SMART AAA_5 910 1102 IPR003593 GO:0016887
Rops6g00415 1474 SMART AAA_5 191 416 IPR003593 GO:0016887
Rops6g00415 1474 Pfam ABC-transporter N-terminal 107 156 IPR029481 -
Rops6g00415 1474 CDD ABCG_PDR_domain1 169 421 IPR034001 -
Rops6g00415 1474 FunFam ABC transporter G family member 34 169 473 - -
Rops6g00415 1474 CDD ABCG_PDR_domain2 870 1108 IPR034003 -
Rops6g00415 1474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 437 IPR027417 -
Rops6g00415 1474 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 166 439 IPR003439 GO:0005524
Rops6g00415 1474 FunFam ABC transporter G family member 40 887 1117 - -
Rops6g00415 1474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 220 IPR027417 -
Rops6g00415 1474 Pfam ABC-2 type transporter 518 730 IPR013525 GO:0016020|GO:0140359
Rops6g00415 1474 Pfam ABC-2 type transporter 1198 1410 IPR013525 GO:0016020|GO:0140359
Rops6g00415 1474 Pfam ABC transporter 901 1052 IPR003439 GO:0005524
Rops6g00415 1474 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 31 1474 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops6g00415 Rops-Chr6 10890103 10910235 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00415 898 1085 Calmodulin-binding Proteins AT2G36910 27.723 4.99e-08 56.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00415 K08711 - gmx:100788067 2562.72