Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00391 ATGCTCTGCAATTTGTTCCCGGAATACAAGAGATTGGTGCTTTGCTTGTTAAAAGAGTCTATGGGCAATTCTATGAATGTGGATGATGTCGTTTCTGAAACCCCTCCCGTGTCTAGAAATGAAGATGATGACTACAAAAGCAGTTTTCATGAGGCAATAGCAGAGGAACCGGATATGCCTGAAGAAGATGAACTTGAAGGAAGAATCGTGTTCCTTCATGGAGGACTCGGAGATGCTGATGAAGTTACTTATATTACTGAAAACTTCACTCTAATCGTGGCTGTTACTTTATCCGCTTGGATACAAGTGAGTGAGGGAAATGTTCCAGTAACAGCAGTTATCAAAACAACTAAAGGATTCCAACAGGCTGGTGCCATTTTTGCTGAGTCTAAATGCTGGTCTATGCTTAAGGGTGGTCTCACAGCAGATACATCAGGACCAGCTGAGCTCTATTTTGAGATGTGCCACAAACATGGGGTGATGCATCGGGATCTCAAACCTGAGAACTTTTTGTCTGCAAGCAAGAAGGAAACAGCACCTCTGAAGGCTATTGACTTTGGTTTGTCAGTTTTCTTTAAACCGGGTGAAAGATTTAATGAGGTTGTTAGAAGTCCTTCTTCAACAAATTCAAAGAAACCCATTTTTGATTTTGAGCCATGTTGTGCTCATTCCTCCTGTTTTTGA 684 0.4152 MLCNLFPEYKRLVLCLLKESMGNSMNVDDVVSETPPVSRNEDDDYKSSFHEAIAEEPDMPEEDELEGRIVFLHGGLGDADEVTYITENFTLIVAVTLSAWIQVSEGNVPVTAVIKTTKGFQQAGAIFAESKCWSMLKGGLTADTSGPAELYFEMCHKHGVMHRDLKPENFLSASKKETAPLKAIDFGLSVFFKPGERFNEVVRSPSSTNSKKPIFDFEPCCAHSSCF* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00391 227 Gene3D Transferase(Phosphotransferase) domain 1 150 209 - -
Rops6g00391 227 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00391 227 PANTHER SERINE/THREONINE-PROTEIN KINASE 153 205 - -
Rops6g00391 227 SUPERFAMILY Protein kinase-like (PK-like) 153 205 IPR011009 -
Rops6g00391 227 Pfam Protein kinase domain 153 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00391 Rops-Chr6 10420743 10425748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00391 153 205 EF-hand Containing Proteins AT3G57530 86.792 2.65e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops6g00391 Pkinase 3.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00391 K13412 - lja:Lj3g3v3500170.1 105.916