Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00377 ATGCTTAAGCAGATGGTAGTCCCTTCCCGAGATATAAAATCAAGGGTCTGGCTAGGCACGACCTCCTCCGCCTCCACCCTCGTCGAGATCGATTCCGGCGACTTCCTCATCTTTCGCGACCTCAAAACTCACGTCTCCGCCCTCTCTCGCTTCTTGCTTTGCCTAGGAATCCGGAAAGGTGACATCATTTTGCTATTCGCACCAAACTCCATGCGCTTCCCCATTTGCTTCCTCGCTGTCATTGTCATTGGCACCATCGCCACCACCTGCAGCCCCTTGTACACCGTCTCAGAACTCTCCACGCAAGTTTACGACTCCAAACCCAAGCTCGTCATCACCGTAAAGGAACTCCTTCACAAATTCAAAGCCTTAGCCTTGGATTTACCTTACATAATGCTCGATGATCCTTCAAGAAGCGTAAATGCATCTAGAATGTTCAGTTCTAGGGTTCGATACGATGCGGATTTGATCGGAGAGTCGAACTTTAGCTTCGACGATGTTCCAGAGAACGTCGTCGTTTCGCAATCTGACATGGCAGCGTTTTTATATTATTCTGGCACGAAGGGGAGGAGCAATGGAGTGGTGCTAACTCACCGGAACATCATGGCGGCGGTGGTGGCGGGAACGGTGGACCGAGACCGTTACGATGAGGGGAAGAACGTGTTCCTGTGCTTCGTGCTGATGCATCACCTTATGCCTCATCAGGCGGGTGTTGATGGGTTTGAGAAAAATCCAACCTTGAAGGTGGTGGAGGGTGGTGGGGGTGGTGGGGTGGTGCTGGTGGGGTGGTGGAATGTGGTGGAGGGGATGAGGGGTGGTGCACTTAAGCCATTCACACATTCATCTTGCCAAGAAGGCCACAGACAGAGTTGTGCTTCATGCATCGACCCGGTGTCCTTTCACCCATCCTCCTCCACCACAACACAACCACCCGCATTATATTCACCACCTTGGCCTTCAATCGTATCCTCTATTAGCCGTGTCCATCCTTCAACTCTTTCGAGTGCTTCACCATTTCTATCTTCCCAATCCTCTTACCCACACCCAACCTTCTTCTCTACACTTAGTTTTTCATGGGACTACCATCAGCTCAAGTATTCACTCTGTTCAGTTGAAGTATTGGAGTTTCTTGAACAAGTGATAAGAGAGGGAAAACAACTTTTGATCCTACGATCATCTCATCTTCAAGCAAAAATACAAATCGTTGGTTCTTGTTCCTAG 1221 0.4963 MLKQMVVPSRDIKSRVWLGTTSSASTLVEIDSGDFLIFRDLKTHVSALSRFLLCLGIRKGDIILLFAPNSMRFPICFLAVIVIGTIATTCSPLYTVSELSTQVYDSKPKLVITVKELLHKFKALALDLPYIMLDDPSRSVNASRMFSSRVRYDADLIGESNFSFDDVPENVVVSQSDMAAFLYYSGTKGRSNGVVLTHRNIMAAVVAGTVDRDRYDEGKNVFLCFVLMHHLMPHQAGVDGFEKNPTLKVVEGGGGGGVVLVGWWNVVEGMRGGALKPFTHSSCQEGHRQSCASCIDPVSFHPSSSTTTQPPALYSPPWPSIVSSISRVHPSTLSSASPFLSSQSSYPHPTFFSTLSFSWDYHQLKYSLCSVEVLEFLEQVIREGKQLLILRSSHLQAKIQIVGSCS* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00377 406 Pfam AMP-binding enzyme 31 234 IPR000873 -
Rops6g00377 406 SUPERFAMILY Acetyl-CoA synthetase-like 35 235 - -
Rops6g00377 406 Gene3D - 12 239 IPR042099 -
Rops6g00377 406 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 26 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00377 Rops-Chr6 10118355 10133926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00377 8 231 Monolignol Biosynthesis Gene Families AT4G05160 41.277 1.14e-43 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00377 K01904 - mtr:25483961 252.292