LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops6g00362	ATGGATACAATCATGGAAGACTCATTTGTTTATTTAAAAGATGATGGTGATTTGAATATGATACATTCCAGTGGTTCGAAGGAGTCAGCAGTGAAAGATTATGAAAATGGGGAAGACAATGATGATGTTTATAAGAGAGTAACCGAGTTGACCCGTGATGACATCTTACATTTACAGTTTGATAGTGAAAAAGAAGCTATAGAATTTTACAACAAATATGCAATGTACCAGGGATTTGTTGTGAGGAAAGATGATGTAACTAGGGATGTTAAGGGTAAGGTTGTGATGCGCCAATTAGTGTGCAACAGAGCTGGTTTGAGGAACAAAAAACATTATGAAAGGGTGGACAGAACAAGAGAGCATAGACCAATTACACGAACAAACTGTCCAGCTAAGTTGAAGGTCCATTTTGACTACCGAACATTGAAGTGGAGGGTCGCATTGTTTGAGGATAGACATAACCATGTTCTTACACCAACAGAACATGTTCACCTACTAACTGGTTATCGTAGGTTGACATATGCAGATGAAGCTCAAGTGGACAACTTGCATCTCTATGGTGTAAGGACATGCCATATAATGGGTTTCATGTTAGCACAGAAAGGTGGATATTCGGACCTAGGATTCTGCAAGAAGGATCTCTACAATCATCTTGATAAACAGAGACGTGCCAAGGTAGATGATGGTGATGCATTTGGTGCACTAAGTTACTTGCAAGCAAAGGCAGATAACGATCCCATGTTGTTTGTCAAATTCACTACCACTGATGTTGGGAGACTGGAGAATTTGTTTTGGGCAGATGGATGTAGTAGGAATGACTTTCAATGCTTTGGAGATGTCCTTGCATTTGATACCACTTACAAGAAGAATAAGTACAACAAGCCGTTGGTGATTTTCTCTGGAAGTTTAAGGTCCAGGTCCTTGCAGAATGCCACCCAACCTGTTGTTAGCCGTGCTTGCTTTGGTTGA	969	0.4025	MDTIMEDSFVYLKDDGDLNMIHSSGSKESAVKDYENGEDNDDVYKRVTELTRDDILHLQFDSEKEAIEFYNKYAMYQGFVVRKDDVTRDVKGKVVMRQLVCNRAGLRNKKHYERVDRTREHRPITRTNCPAKLKVHFDYRTLKWRVALFEDRHNHVLTPTEHVHLLTGYRRLTYADEAQVDNLHLYGVRTCHIMGFMLAQKGGYSDLGFCKKDLYNHLDKQRRAKVDDGDAFGALSYLQAKADNDPMLFVKFTTTDVGRLENLFWADGCSRNDFQCFGDVLAFDTTYKKNKYNKPLVIFSGSLRSRSLQNATQPVVSRACFG*	323

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops6g00362	322	PANTHER	OS01G0519700 PROTEIN	55	301	-	-
	Rops6g00362	322	Pfam	FAR1 DNA-binding domain	68	158	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops6g00362	Rops-Chr6	9761141	9765690	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Rops6g00362		FAR1	7e-20	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops6g00362	-		-	ccaj:109792835	372.089