Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00357 ATGATGGCACAGAACGATGAAGGGAAACAGTGGGCTGTAGCAGACATTGAAGTGACCATGTTGGATAACCATGCCAACTTAAAGATACTCTCAAAGAAACGACATGGGCATCTCATGAAAATCGTTGTTGGGCTTCAAAGTCTTAGGCTTACCATTCTTCACCTTAACGTTACCACTCTTGAAGATATGGTCCTTTACTCAGTTAGTGTTCCAGAAGAAGTGACTTTCAACTAA 234 0.4145 MMAQNDEGKQWAVADIEVTMLDNHANLKILSKKRHGHLMKIVVGLQSLRLTILHLNVTTLEDMVLYSVSVPEEVTFN* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00357 77 PANTHER TRANSCRIPTION FACTOR FAMA 11 70 IPR044283 GO:0003700|GO:0010052
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00357 Rops-Chr6 9647546 9647779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00357 12 70 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 64.407 2.27e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00357 - - gmx:100789380 112.464