Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00345 ATGAAGAACTCTGCTTCAGATCACGGATTTTACATTGAGAGTGATGAAGAAGATGCGGAAAAGGGGATGAACAAAGAGGAAAATGATGGAAACGATTCGGATTATTCCTATGACTCGAATGATAACTCGACAATGGGAAAACCCAGTTCTTACAGCTTGGCTTGGCCTCAAAGTTACAGGCAATCCATTGATCTATATGGTAGTGTCCCATCACAAAATACAGGATTCTTGGGCACCCAGTCACTGTCAAGATTAGGCAGTTCTTTTCTTTCTTCATCTTTGATAAGGAGGCACACTCCTGAGATAATACCATCAGCACAAAAGCCTCTGTTACCAGAAGAGAAACATCGACATAGCTCTCATACCTTGCTTCCTCACCATCCATCTAGAAGGTCTTCAATTAAGAAGGATGTTTCCAAGGTCTCTCATGAAGTTCATATTTCTGGCGAATGCAATTTTGGACAAGCTGTACTTAATGGCATAAATGCCCTTTGTGGTATTGGAATCCTTTCATCCCCTTATGCCCTTAAAGAAGGTGGATGGGTTGCACTCTCTATCTTGTTAGTATTTGCAGTGTTTTCCTTTTATACTGGGTTGCTCTTGCGTTATTGCTTGGATAGTGAACCTGGGCTTGAGACATACCCTGACATTGGCCAAGCAGCTTTTGGTACTACTGGACGCGTTGTCATTTCTATAATACTATACATGGAATTATATGCTTGTTGCATTGAATACATAATTGTGGAGAGCGACAACTTGTCTTCATTATTTCCAGATGCACACTTAAGTTTGGGTGGAATTCACTTGAATGCACACATTCTATTTGCGATCTTGACCTCCTTGGCTCTTCTTCCTACTGTTTGGCTTCGTGACCTACGCATTCTCAGTTACATCTCAGCTTGTGGAGTTATTGCTACATTTTTGGTGGTTCTCTCCTTGTTTTGGGCTGGCTTCTTAGACAACGTTGAGTTTCATACCAAAGAAACAACAACACTCAAGCTAGCAACTTTTCCTGTTGCTGTTGGTCTCTATGGTTACTGCTACGCAGGACATGCAGTGTTCCCTAACCTCTATACAGCCATGGCAAATCGAAATCAATTCCCTGCAGTGCTCTTAACATGTTTTGTTATTTGTACTGCAATGTATTGTGCTGTAGCTGTTATGGGATATGCAATGTTTGGAGAAGCTACCCTCTCTCAGTTCACTCTTAACATGCCCTCAGGCTTGGTGGCCTCTAAAATTGCTGTTTGGACTACGGTGGTTAATCCATTTACCAAATATCCTTTATATGTTATGCGCTATATAAATGCATTTGTGCTTGCATATATACCTACATTTACAGTGTGGAAAAAGTCATCCGGAATAAAGAATAGAGCCAGTGAATACTTTATTGAAATGAATATGTTTTATAGCATTTTTAGTTCTGAATGCTTCGATATGGAAACACAAAGGGAGAGCAAAACAGCACTAGTAGTTTCTACACTGCTTGTTGGCCTTTCAGTACCCTTTTTCGGTTTGGTGATGTCATTGATTGGATCTTTACTCACAATGTTTGTTTCCTTGATTCTTCCCTCTGCATGTTTCCTAAGCATCAGGAATGGCAGAGTCTCTCGCTTTCAGGTAGCAATTTGTATTACAATTATTATAGTTGGTCTTATATCTTGTGCTTTTGGATCATACTCAGCCATCTCGGAGATTATTAAGGAGTTGTTTGGATGA 1719 0.4031 MKNSASDHGFYIESDEEDAEKGMNKEENDGNDSDYSYDSNDNSTMGKPSSYSLAWPQSYRQSIDLYGSVPSQNTGFLGTQSLSRLGSSFLSSSLIRRHTPEIIPSAQKPLLPEEKHRHSSHTLLPHHPSRRSSIKKDVSKVSHEVHISGECNFGQAVLNGINALCGIGILSSPYALKEGGWVALSILLVFAVFSFYTGLLLRYCLDSEPGLETYPDIGQAAFGTTGRVVISIILYMELYACCIEYIIVESDNLSSLFPDAHLSLGGIHLNAHILFAILTSLALLPTVWLRDLRILSYISACGVIATFLVVLSLFWAGFLDNVEFHTKETTTLKLATFPVAVGLYGYCYAGHAVFPNLYTAMANRNQFPAVLLTCFVICTAMYCAVAVMGYAMFGEATLSQFTLNMPSGLVASKIAVWTTVVNPFTKYPLYVMRYINAFVLAYIPTFTVWKKSSGIKNRASEYFIEMNMFYSIFSSECFDMETQRESKTALVVSTLLVGLSVPFFGLVMSLIGSLLTMFVSLILPSACFLSIRNGRVSRFQVAICITIIIVGLISCAFGSYSAISEIIKELFG* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00345 572 Pfam Transmembrane amino acid transporter protein 152 563 IPR013057 -
Rops6g00345 572 MobiDBLite consensus disorder prediction 1 49 - -
Rops6g00345 572 PANTHER OS05G0424000 PROTEIN-RELATED 159 550 - -
Rops6g00345 572 MobiDBLite consensus disorder prediction 35 49 - -
Rops6g00345 572 MobiDBLite consensus disorder prediction 114 135 - -
Rops6g00345 572 MobiDBLite consensus disorder prediction 9 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00345 Rops-Chr6 9330227 9343289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00345 1 505 Amino Acid or Auxin Permease AAAP Family AT2G39130 60.194 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00345 K15015 - gmx:100781123 766.918