Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00339 ATGGCCACCGCAGCACCACCACCCCCACCAACTACGGTGGTGGAACCCGACACATCATTGCCGGAAACCACCCCATTGAGCCACCCCGTGTTCACCCGAATCCGCCTTGCCACCCTCTCCGACGTGCCCCACATCCACAAACCGATACACCAAATGGCAATCTTCAAACGCCTCACACACATTTTCTCAGCTACCGAGTCTTCACTCCCTTCCACACTCTTCTCTCCCACCATCCAACCCTTCCATTCCTTCACCATCTTTCTTCTAGAAGCTTCCCCAAACCCCTTCACTGACACCCACTTCGACATCAACCCTTTCTACAAGCCCACCACAAAAGTTGTGAACTTGGACCTCCCAATTGATGACCCAGAAAGAGAAATGTTCGAAACTCAGCATGGTGATGATGGTGTTTGTGATGCCGGGTTTGTGTTCTTTTTCCCTAACTACCCATATTTTCAGGGGAAGCCTGGGTTCTATGTTGAGGATCTGTTTGTGAGGGAGTGTTATCGGAGGAAAGGGTTTAGGAGGATGCTGCTCTCTGAGGTTGCAAAGCAGGCTGTGAAGATGGGATATGGGAGTGTGGAGTGGGTTGTGCTTGATTGTAATGTTAATGCCATTAAGTTTTATGAGGAAATGAGTGCTAAGATTTTGAAGAAATGGGTTGTGTTTGATTAAGCACAAGATTCTTCAAGCCCATTCTTTGTTCATCCCAATGAGAATCCACCTTTGGTTCTAGTTTCACCCATGATAGATCCAACTATCAATCTTGGTCCCAAGCCATGA 783 0.4802 MATAAPPPPPTTVVEPDTSLPETTPLSHPVFTRIRLATLSDVPHIHKPIHQMAIFKRLTHIFSATESSLPSTLFSPTIQPFHSFTIFLLEASPNPFTDTHFDINPFYKPTTKVVNLDLPIDDPEREMFETQHGDDGVCDAGFVFFFPNYPYFQGKPGFYVEDLFVRECYRRKGFRRMLLSEVAKQAVKMGYGSVEWVVLDCNVNAIKFYEEMSAKILKKWVVFD*AQDSSSPFFVHPNENPPLVLVSPMIDPTINLGPKP* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00339 259 MobiDBLite consensus disorder prediction 1 15 - -
Rops6g00339 259 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 86 229 IPR000182 GO:0016747
Rops6g00339 259 Pfam Acetyltransferase (GNAT) family 140 211 IPR000182 GO:0016747
Rops6g00339 259 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 33 221 IPR016181 -
Rops6g00339 259 Gene3D - 32 230 - -
Rops6g00339 259 PANTHER DIAMINE N-ACETYLTRANSFERASE 32 224 - -
Rops6g00339 259 MobiDBLite consensus disorder prediction 1 25 - -
Rops6g00339 259 CDD NAT_SF 140 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00339 Rops-Chr6 9139117 9142339 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops6g00339 Acetyltransf_1 5.2e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00339 K22883 - gmx:100782562 289.271