Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00336 ATGGCCGCCGCAGCACCACCACCCCCACCAACTCCGGCGGCGGAACCCGCCTTAACATTGCCGGAAACCACCCCAGTGGGCCACCCCGTTTTCACCCGGATCCGCCTTGCCACCCCTTCCGACGTGCCCCACATCCATAAGATGATACACCAAATGGCAGTCTTCGAACGCCTCACACACATGTTATCAGCCACAGAATCTTCACTCTCTTCAACACTCTTCTCTCCCACCACCCAACCCTTCCACTCCTTCACCATCTTTCTTCTAGAAGCTTCCCCCAACCCCTTCATTGACACCTACTTCGACAACGACCCTATCTACAAGCCCATTACAAAAGTTGTGAACTTGGACCTCCCAATTGATGATCCCGAAAGAGAGATGTTCAGGACTCAGCATGGTGATGATGTTTTTGTTGCTGGGTTTGTGCTGTTTTTCCCTAATTACTCAACTTTTCTGGCTAAGCCAGGGTTCTATGTTGAGGAACTGTTTGTGAGGGAGTGTTATAGGAGGAAAGGGTTTGGGAGGATGCTTCTCACTGCAGTGGCAAAACAGGCTGTGAAGATGGGATATGGGAGGGTTGAGTGGGTTGTGCTTGATTGGAATGCTAATGCTATTAAGTTTTATGAGGATATGGGTGCTAAGATCTTGCAGGAATGGAGGCTTTGCAGGCTCGCTGGGGATTCTCTCCAGGCTTATGGAGGTGCTGAGTAA 711 0.5063 MAAAAPPPPPTPAAEPALTLPETTPVGHPVFTRIRLATPSDVPHIHKMIHQMAVFERLTHMLSATESSLSSTLFSPTTQPFHSFTIFLLEASPNPFIDTYFDNDPIYKPITKVVNLDLPIDDPEREMFRTQHGDDVFVAGFVLFFPNYSTFLAKPGFYVEELFVRECYRRKGFGRMLLTAVAKQAVKMGYGRVEWVVLDWNANAIKFYEDMGAKILQEWRLCRLAGDSLQAYGGAE* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00336 236 PANTHER DIAMINE N-ACETYLTRANSFERASE 32 232 - -
Rops6g00336 236 Pfam Acetyltransferase (GNAT) family 135 212 IPR000182 GO:0016747
Rops6g00336 236 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 33 226 IPR016181 -
Rops6g00336 236 MobiDBLite consensus disorder prediction 1 22 - -
Rops6g00336 236 Gene3D - 32 235 - -
Rops6g00336 236 MobiDBLite consensus disorder prediction 1 16 - -
Rops6g00336 236 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 86 230 IPR000182 GO:0016747
Rops6g00336 236 CDD NAT_SF 138 194 - -
Rops6g00336 236 FunFam probable acetyltransferase NATA1-like 32 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00336 Rops-Chr6 9084965 9086124 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops6g00336 Acetyltransf_1 3.4e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00336 K22883 - csav:115706319 326.25