Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00334 ATGAAGTTTGGGCCTTCTGAAAACAATGAATCAAAGGATTTAGAGTGGCTTTCTAAGCTTTATGGTGACTCAAAGAAAAAACGGGTTATAAGAGGAGCTGAGAAGGGTGGTGGGAAAGGAGAGAGCTCATCAAGTTCTGGTGTGGTAAATGGTTTCGAACTGTATGATCTTGTGTGTTTTGGCAAGAAGGACTTTGGTGTGATAATAAGCATGGATAAAGATGACAGCTACAAGATTCTAAAAGAAAGTTCAGATGGACCTGTTGCTGTGACCATTGAACGACATGAAATAAAGAGCGGACTTGATTTGAAACTTAGTGCCCAAGATCAGCATGCTAAGACTATATTGGTTAATGATAATGTCAGGTTTCTGGAGGGTCCTTCTGAGGGTTCTCCTGGAACTGGCAAAACCACTAGGTTACTGGCCCTTGTGCACGAGCTTCTCGGATCCAATTGCAAGGAAGCCATTCTGGAACTGAATGCATCAGATGATAGGTTTTGGCAACTCACGGGTATGTCTTGTATGCATGCAATTGCATACAAAAATCAAAAGCCTGAAGACTATTGTCATAGTTGGCTAAGTATTAGATCTTACAATGCAACCTACGAATATTTTATTCAACCTACAAAAAGCCAGCAATATTTGGAGAAAACAAACATTACTCAGCCTGCACCACCACCCATTAGGAGGCCTGCTGGTAGACCTAGAAAACAGAGGAGAGAAGATAAAAATGATTTACCTGTGAATGACCATAGAATGAAGAGATCATATGTTGATATCATTTGCTCTAGGTGTGGTGGGTCAAACCATAATAGTAAGTCTTGCCACTACCAAGGTGTACCACAACGTGCAAGACAATGA 861 0.41 MKFGPSENNESKDLEWLSKLYGDSKKKRVIRGAEKGGGKGESSSSSGVVNGFELYDLVCFGKKDFGVIISMDKDDSYKILKESSDGPVAVTIERHEIKSGLDLKLSAQDQHAKTILVNDNVRFLEGPSEGSPGTGKTTRLLALVHELLGSNCKEAILELNASDDRFWQLTGMSCMHAIAYKNQKPEDYCHSWLSIRSYNATYEYFIQPTKSQQYLEKTNITQPAPPPIRRPAGRPRKQRREDKNDLPVNDHRMKRSYVDIICSRCGGSNHNSKSCHYQGVPQRARQ* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00334 286 Gene3D - 78 218 IPR027417 -
Rops6g00334 286 MobiDBLite consensus disorder prediction 235 250 - -
Rops6g00334 286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 130 165 IPR027417 -
Rops6g00334 286 PANTHER SUPPRESSOR OF TY 5 2 133 IPR039659 GO:0006357|GO:0032784
Rops6g00334 286 MobiDBLite consensus disorder prediction 218 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00334 Rops-Chr6 8975192 8978547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00334 130 165 Core DNA Replication Machinery Family AT1G63160 80.556 6.45e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00334 - - aprc:113872420 204.527