Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00322 ATGGTGCGAGTGAAGGCAAATGAGTCAAGAGAAAGAGGTTGGTATGATGTGAAAGTCCTTCCAGTACATGAGTTCAAATGGTCATTTAAGGAGGATGATGTTGCAGTCCTTTCGTCCCCTAGGCCTGGATCAGTCAGATCCAAGCAGAACAGTTCATCTTTAGTTCAGGATGATGGGGAATCAGAAATCAATGGACGTGTGGTGGGTACAGTTAGGCGACACATAGCTATCGATACCCGTGATCCTCCTGGTGCAATTCTCCACTACTATGTTGGGGACTCCTATGATCCTAGCAGGGTTGATGATCATATCATAAGAAAACTTCAAATTGGAAGCATCTGGTATCTCACAGTGCTTGGTTCTCTTGCTACCACACAGTGGGAGTATATTGCTCTACATGCATTTCGTCGCTTAAATGTGCAGATGCAAACTGCAATCCTTCATCCTAGTCCTGAACACTTTCCAAAATATGAGCAACAGACCCCGGCCATGCCTGAATGCTTCACACAGAACTTTGTTGAGTATCTACATAGGACCTTCAATGAACCCCAATTAGCAGCAATCCAATGGGCAACAATGCATACAGCTGCCGGTACAAGTAGTGGGACAACAAAGAGGGCTGCCAGTGATGTACTGCTTTCAACAAAGGAGTCTGCACACATTTTTCTGATGAATTTTCTTTTCAAATCAACCAGAGAAGATTCACCTTTAAAGGATACTAATTTTGGAAAGAGGTTTCAAGATATTGTTGGAAGTGCTTACTATGTAGCACCAGAAGTGTTAAAACCGAAGTCAGGCCCTGAATCAGATGTATGGAGTATTGGTGTGATTACATACATATTGCTTTGTGGGAGATGCCCATTTTGGGATAAGACCGAGGATGGTATCTTCAAGGAGATCTTACGGAACAAGCCTGATTTTCGGCGGAAACCATGGCCAACCATAAGTAATGCTGCAAAAGATTTTGTGAAGAAATTGTTGGTAAAAGATCCACGGGCAAGATTGACTGTTGCTCAGTTAAATGTGGACCAAAAAAAAGCACATAGTGTTGCAGCTTGA 1059 0.4297 MVRVKANESRERGWYDVKVLPVHEFKWSFKEDDVAVLSSPRPGSVRSKQNSSSLVQDDGESEINGRVVGTVRRHIAIDTRDPPGAILHYYVGDSYDPSRVDDHIIRKLQIGSIWYLTVLGSLATTQWEYIALHAFRRLNVQMQTAILHPSPEHFPKYEQQTPAMPECFTQNFVEYLHRTFNEPQLAAIQWATMHTAAGTSSGTTKRAASDVLLSTKESAHIFLMNFLFKSTREDSPLKDTNFGKRFQDIVGSAYYVAPEVLKPKSGPESDVWSIGVITYILLCGRCPFWDKTEDGIFKEILRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARLTVAQLNVDQKKAHSVAA* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00322 352 SMART serkin_6 104 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00322 352 Gene3D Transferase(Phosphotransferase) domain 1 208 351 - -
Rops6g00322 352 ProSiteProfiles Protein kinase domain profile. 1 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00322 352 MobiDBLite consensus disorder prediction 38 60 - -
Rops6g00322 352 MobiDBLite consensus disorder prediction 42 59 - -
Rops6g00322 352 SUPERFAMILY Protein kinase-like (PK-like) 245 347 IPR011009 -
Rops6g00322 352 Pfam Protein kinase domain 243 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00322 352 PANTHER SERINE/THREONINE-PROTEIN KINASE 224 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00322 Rops-Chr6 8519959 8522905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00322 225 339 EF-hand Containing Proteins AT2G17890 82.927 6.38e-65 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops6g00322 Pkinase 1.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00322 - - gmx:100803350 398.667