Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00313 ATGGCAGGCACCACCCTTTCAATGCAAGAATCTGTGAAGTCTGATGAGCTTATGAACTCTCCAAGCGCAGATGTAGACGTGATTTGCGAGAAGGCAGGAGCCTCAAATGGCATGGCCCTTGTGGATATTAATTCGGAGTTGAAGGATTCTCAAGTTTGGAGTTCTTATGCCCCTGATATATACAGCAACATTCGAGTCAAAGAGCTTGAAAAGAGACCATTACCCACCTACATGGATCGGTTGCAGCGAGATATTACTGCAAGTAGGGGTGGAATTCTGGTTGATTGGCTTGTGGAGGTTTGTGAGGAATATAAGTTGGTTCCAGACACTCTTTACCTGATAGTAAACCTCATTGATCGGTTTCTCTCAGCAAGTTTGATTCGGAAACAAAGGCTCCATGAGGTCAACAACCTCATGCTCAGTTGGCTTGAAGCAATATCCTCTGATCTTGAAGCTGAATCGGATGAGGCCATTTCTAAGTGTGATTTGAAAGAGAGTGAGAAAGTAAGAGAGTTTGAGATTTAG 525 0.4381 MAGTTLSMQESVKSDELMNSPSADVDVICEKAGASNGMALVDINSELKDSQVWSSYAPDIYSNIRVKELEKRPLPTYMDRLQRDITASRGGILVDWLVEVCEEYKLVPDTLYLIVNLIDRFLSASLIRKQRLHEVNNLMLSWLEAISSDLEAESDEAISKCDLKESEKVREFEI* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00313 174 Gene3D - 73 133 - -
Rops6g00313 174 Pfam Cyclin, N-terminal domain 59 135 IPR006671 -
Rops6g00313 174 Gene3D - 59 72 - -
Rops6g00313 174 PANTHER CYCLINS 45 133 IPR039361 -
Rops6g00313 174 SUPERFAMILY Cyclin-like 49 134 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00313 Rops-Chr6 8409767 8414800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00313 20 133 Core Cell Cycle Gene Families AT1G80370 51.754 1.20e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00313 K06627 - gmx:547780 193.741