Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00304 ATGTTGCACCTAGGAGTGAAGCTCCCAAACCAGGTTCATGTCCTGGGGGCACCAACTGCTGCGACAGCTGCCATTGATAATGCATCACCGCTCCAAGATGGGAAGATCTCGGCCCTTGATTCCACCAATGGAGCCACCACTTCGAACCACGCTGTTCTCTCCACTTCAGCTCGAGCTGGTTCTGCTACAAACGTGTCTTCCGCGTTTGTAGGAGTCAGTGAAAACGAGACTGATGATTATGATTGTAAAATTGTTAAGGGTGTTCTTAGCCACCAAATGAAGCAGTTTGTGATTGATAGGAATAAGGGTGTTCTTAAGTCATGGCTACATCCTGTCCAGTACCGGACAAAGCTTTGCAAGGATGAGACAGGTTGCTCTAGAAAAGTTTGCTTCTTTGCTCATAAACCTGAAGAGCTACGTCGGTCTATGCTTGCACTGGGTCAGCCATGCCTTCACCAAAATCTTATTCGGCTAGTGGACTTGGCACGACAGTGCGGAGCCCCACCTTACTCATGTAGACTCAGCTCATTCGAACACCACCCAGCCACATGA 552 0.4891 MLHLGVKLPNQVHVLGAPTAATAAIDNASPLQDGKISALDSTNGATTSNHAVLSTSARAGSATNVSSAFVGVSENETDDYDCKIVKGVLSHQMKQFVIDRNKGVLKSWLHPVQYRTKLCKDETGCSRKVCFFAHKPEELRRSMLALGQPCLHQNLIRLVDLARQCGAPPYSCRLSSFEHHPAT* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00304 183 PANTHER UNKEMPT FAMILY MEMBER 103 144 IPR045234 -
Rops6g00304 183 Gene3D Creatinase/methionine aminopeptidase superfamily 17 106 IPR036005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00304 Rops-Chr6 8153881 8154524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00304 103 140 C2H2 Transcription Factor Family AT5G12850 71.053 1.19e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00304 - - sspl:121778181 83.5741