Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00293 ATGGATCCAAGCATGGAACTCCTCAATCAATTCATTGGGATGAACCCACATGTGATGGACCACTCAAACTTGAGTATGCAGAACTTGGTGCCTTTATCCTTTGACAACATATTAGGTCCTCAAGAACCTGAGTTTCTTGGAAAATTGGAAGAAAATTTTCCTCCTGGACTTGTCCATCATGTTAATCACAATTCACTTCCAGTTTCCTCTATAATTTTTTCAGTAGGAAATGAAATCCATGAAGGGGAAACTTCTGGAACAACAGCAACATTTGTTCTGGTTGATGAATGGACTGTCACTGCTGCATCTGAAGGGGATTCTCCTTGCATATTAGATACTCAAGAAAGTGTAGTTTCTCTCTTGACAGTTTATCTCCTTTTATCTCAGCATTGGAACTTAGACCACTTGATAGTTCTATCGAGCTTGGGGAATCTGCATCAATTGAATTTGTAG 453 0.3929 MDPSMELLNQFIGMNPHVMDHSNLSMQNLVPLSFDNILGPQEPEFLGKLEENFPPGLVHHVNHNSLPVSSIIFSVGNEIHEGETSGTTATFVLVDEWTVTAASEGDSPCILDTQESVVSLLTVYLLLSQHWNLDHLIVLSSLGNLHQLNL* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00293 150 SUPERFAMILY PP2C-like 51 125 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00293 Rops-Chr6 7558484 7562964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00293 53 150 PP2C-type Phosphatase Gene Family AT1G09160 43.564 1.78e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00293 - - gmx:100806942 110.153