Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00287 ATGACGGAGGAAGGCAAGGGACATGAGGATGGACAAGCCTTCGAACCTGAAACCGAAGGTGAATCACCCGTTGAAAGTGCCAAACACTTTGAACATGAAACTGAAGGCGAATCAATTGTTGAAACTGCCAAACTTTTAGGGATTCTGCTCCAATGCCTCAAATCGGTGTCCATAGCTATGCAGGTTATGAAGAAGGGTGATACTATTTTCATTGGTAAATATGTGCTTACAGGAAGTGAAACAATTTTTGTATGGCTGGGGGTAATGCAATCTCTACACCCTTCCATTGCTAAAGTGCCTGGACCATCAAAGCTTGTTTCTTGGGTAGCAAAGTATGTTGCTTCTGGTTTAGATGCTTTATACCTAACTAGATTTGAAGCTGCTGAACATTGGCAGGCGTTGTATTCTTCTGTTGTCATTTATTGGGGAGCTTCTGTGAGCCATTTATTGGAGAAGCCTACTTCAATATATTCACAAAAAGTGGTACTTGAACGAGAAAGAACCGGTTTGCTAAGATGTGAGAAAAGTTGCAGACTGAGATGGATCAACTACTTGAGATCAGATGTGAAGAGAGGCAACATCACTCCTCAAGAGGAAGAGATCATTGTCAAGTTGCATGTTGTCCTTGGTATTTCTATTCAAAATGGTATACAATGGATGGCTGCTCGTTGTGAGCTACACTTTAGGAAGCAGACCAAAGCAGCTATTGTCATTCAGAGCCACTGCCAGAAATACTTGGCTCAACATCATTTTATGAACTTAAAGAAGGTAGCAATTACCACACAATATGCAAGGAGAGGAAAAGTTTCTTGGCGAGAATTACGAAAGCTCAAGATGATTGACATGGAAGATGCAAAAACACAAGAAAACGAAAATTTACATTCTGCTTTGCAAGAGATGCAACGTCAGTTTAAAGAAACGAAGTTATTGCTTCAAACGGAGCATGAGGCTACAAAAAGAGAAGCAGAGAGAGTGTCTGTCATCTGTTGTTTGACCATGCTTTGTTGGAGAAGATCACTAATGAAAAAGAAACTTAAGCGAGAAGGTGAACACCCTTCCCTTGCTTCTCAATCTCAGGGAGTTGTACCTGAGATTGCTGGCTCTAGTATGAGTTTGATGCCTAGTTGTGATGGAAACTCGCCTCCTTGTCTTATGAAGTCCGAATTGAAGGTGAATGACATTTTTGAGTTTGTGGATTTATTTGAAGTTGTGGATCAAAGAGTGAAGCTGGTTGCTAGTTACTTACCAGAGGAACAGTCTGATTCTAAGTTTCCAGGGGAAGATTAA 1287 0.4095 MTEEGKGHEDGQAFEPETEGESPVESAKHFEHETEGESIVETAKLLGILLQCLKSVSIAMQVMKKGDTIFIGKYVLTGSETIFVWLGVMQSLHPSIAKVPGPSKLVSWVAKYVASGLDALYLTRFEAAEHWQALYSSVVIYWGASVSHLLEKPTSIYSQKVVLERERTGLLRCEKSCRLRWINYLRSDVKRGNITPQEEEIIVKLHVVLGISIQNGIQWMAARCELHFRKQTKAAIVIQSHCQKYLAQHHFMNLKKVAITTQYARRGKVSWRELRKLKMIDMEDAKTQENENLHSALQEMQRQFKETKLLLQTEHEATKREAERVSVICCLTMLCWRRSLMKKKLKREGEHPSLASQSQGVVPEIAGSSMSLMPSCDGNSPPCLMKSELKVNDIFEFVDLFEVVDQRVKLVASYLPEEQSDSKFPGED* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00287 428 Gene3D - 228 281 - -
Rops6g00287 428 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 166 314 - -
Rops6g00287 428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 280 IPR027417 -
Rops6g00287 428 Coils Coil 283 310 - -
Rops6g00287 428 MobiDBLite consensus disorder prediction 1 33 - -
Rops6g00287 428 SUPERFAMILY Homeodomain-like 171 210 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00287 Rops-Chr6 7450010 7457719 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00287 210 328 Myosins gene family AT4G28710 47.368 1.89e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00287 K10357 - gmx:100819463 153.295