Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00255 ATGGGTTCCTTGGAGAACTACCGCGTGATCGAGCTTGTTGGTGAGGGTTCCTTCGGTAAGACTGTTGCGATGAAGTTCATATTGAAGCATGACAAAACTGAAAAGGACATTCACAATTTAAGACAAGAAATCGAGATCTTAAGAAAGTTGAAGCATGAAAATATCATTCAAATGCTTGATTCCTTTGAAAGCCCGCAAGAGTTTTGTGTTGTCACAGAATTTGCGCAAGGTGAGCTATTTCAGATTCTCGAGGATGATAAATACCTTCCTGAAGAACAAGTTCAAGCAATTGCGAAGCAATTGGTAAGAGCCTTACATTATTTGCATTCCAACCGGATCATCCATCGTGATATGAAGCCCCAGAATATTCTCATTGGTGCTGGATCTGTTGTCAAGCAACCAGAAAATCGACTAACTTGGCCTGCTCTTCTTGAACACCCCTTTGTTAAAGAAACCTCCAATGAACTTGAGACCAGGGAATTGTGGGAGATAAGTGGTTCACCCAAGGATAGTGATACGACACAGAGGGTTGAAGGAAAAACCATTCAAACTTTAACAGGCAAAAACAATCGCACAACAGGTTTGGAAGAATATATTGCGTCACGACTCCAGATTGAAGCTCAATTAAATGGTCTTCACATAAACAGAAACAGTTCTTCAGTGCGCGATGAGTCCCCTGGATTTTCAAATCAAAATACTGTAGGAGAGTCAGGCTGCCAAAGATTGGACAGACTTGAAAATAACTCACGCATAGTCAAAGGTGCACAAATAATTGGTCAAGATAATGAAGCGTTGGGACATATTCTGCTACCACTGAAAAAATGGTCAATGGGATCTCAAAATATTTGCAGTGATCAAGATATTCCTGCTTTGAATCAATCATTGAGGATTCTCTCAAACCTAGTTGCTGTGGGTGTCTTCAGTTCTTGTGGACGAATAGATGAATTAATAAGCGAACTCCTTGTGTTTACTAGATCTATAATATTCATGAAATCCGCTAAAGTTATTGACTTGATAACAAAGAGTTTCTCCATCGCTAAAATTTTGTTAGATAATGGTGGGAGTTGCACATCAAGCTCTTATTTGAATTACCGGGTTGAATTTGTGGAAATCTATTCTCAGGTTGTAACTTCGACTAATGATGCATCTGGAAGAATTCTGTATGAGTCTAGTGCCTGCATTACAGTCATGCTGTCTAAAGTTGCTCAGGTGCTTGGATCATCTCAAATTTCAGGCTCAGAGACATTGAATGAATCAGCTAACAGAATTTTAGAGCATGCAAAAACATCTGAATTAGTGGACCATTTGCGTCGGTGCTTAGCCACTTCAGGCTCGAGTCTTATTTCAGGTTCTTCCAATATGCTACAGGTTGCTTCGGAGGCATGCAGGGCTGTCTGGTCTTTGATTAATGCACTGGATAAAAGTGCCATTTTGTTTCCCATAAATGCTTTGAGGAGTCATTCTTTGCAGAGGATGGAAATTGTGGATCACGAGCAAGAACTCTTGTTTGATGCAGAATCAACAAAAATTGTTGATGCAATGACAAGAGCATTCCTGAGATCCAAAGCTGTTCAGGTTGCTGTTTACCATTGTTTTCACCAACGTCTTGAGTCTGCAATGAGTTGTGGTCTTCAGCTATTGTCAAGGTGCTGCCTCCATAGTGGAATTGTTCCAGCTCTCCTGTGTGCTCCTCTCTTAACATAG 1704 0.4055 MGSLENYRVIELVGEGSFGKTVAMKFILKHDKTEKDIHNLRQEIEILRKLKHENIIQMLDSFESPQEFCVVTEFAQGELFQILEDDKYLPEEQVQAIAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKQPENRLTWPALLEHPFVKETSNELETRELWEISGSPKDSDTTQRVEGKTIQTLTGKNNRTTGLEEYIASRLQIEAQLNGLHINRNSSSVRDESPGFSNQNTVGESGCQRLDRLENNSRIVKGAQIIGQDNEALGHILLPLKKWSMGSQNICSDQDIPALNQSLRILSNLVAVGVFSSCGRIDELISELLVFTRSIIFMKSAKVIDLITKSFSIAKILLDNGGSCTSSSYLNYRVEFVEIYSQVVTSTNDASGRILYESSACITVMLSKVAQVLGSSQISGSETLNESANRILEHAKTSELVDHLRRCLATSGSSLISGSSNMLQVASEACRAVWSLINALDKSAILFPINALRSHSLQRMEIVDHEQELLFDAESTKIVDAMTRAFLRSKAVQVAVYHCFHQRLESAMSCGLQLLSRCCLHSGIVPALLCAPLLT* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00255 567 SUPERFAMILY Protein kinase-like (PK-like) 4 132 IPR011009 -
Rops6g00255 567 ProSiteProfiles Protein kinase domain profile. 7 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00255 567 Pfam Protein kinase domain 19 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00255 567 PANTHER PROTEIN KINASE RELATED 4 132 - -
Rops6g00255 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 113 125 IPR008271 GO:0004672|GO:0006468
Rops6g00255 567 SMART serkin_6 7 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g00255 567 Coils Coil 30 50 - -
Rops6g00255 567 Gene3D Transferase(Phosphotransferase) domain 1 2 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00255 Rops-Chr6 6125517 6143329 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00255 4 132 MAP Kinase Kinase Kinase AT5G49470 33.099 1.07e-17 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Rops6g00255 Pkinase 2.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00255 K06228 - gmx:100792102 600.127