Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00254 ATGCCAGGCTTTCCTGTTGTAGCTCGTGCAACCTCATGTCATCCTGATGCTTGTGAGCGTTTATCTGCGGAAGAGGAGGTTGCTGCAGAAGAGAGTCTTTCGATTTATTGCAAGCCTGTAGAACTCTACAATATTCTTCAGCGACGTGCTATAAGAAATCCATCATTCCTCCAGAGATGTTTGGACTACAGGATAAAGGCTAAACATAAGAAGAGAATACAAATGACAGTGTCTCTGTCAAGGACGGTTACTGAAAGCCAGACTGCGTTTCCATTGTATATTTGTCTGGCAAGGCTGATTTCTGATCTTGGAGTTCCAGAGTATTCTGCAGTGTATCGAATCAGTCGGATTTTCATCTTTCGAAATTCCCCTGGAATTGATTCTAACACTCAAGTCCAAGCAAATTTTACACTTCCTGAAGTCAATAAGTTAGCTGTGGAAGCTAGATCTCGCTCACTTTTTATCTTGTTTGTCAGCACTGTGGAAAACTCAAATATATCATCTGGAGTCGATGCAAACTTGATGCCTTTGGATGTGCCTTCTTTTGAATCAAGAGCTAGAGAATACTGCCTTTATGGGAAAGTATCTTTAGAATCACTTTATATGGCTTGGGATAGTTCTCCAAATTTTCATTTGGGACAGCGAGCTGAGATCATGTCAACTGTGGATTTGCTTCCATGTATTATGAAGTCAGAGTTTCAAAATGAGGACACGAGAGTCTCCATTCAAGTTCCCTTTAATTCAGAGAATGTGGGTACATCAAAGCAAGTACAAATCACAATTTCCGCAGAAGAGTTTGGTGCCAAAGAAAGATCTCCCTACCATTTGTATGCAGGCAGTGAAGTACCATCATCATCATTAACTCATATTATTCGGTTGAGGGAAGGAAATGTCATGTTTAATTACAGGTATTACAATAATAAGTTGCAGAGAACAGAAGTCACGGAAGATTTCTCCTGTCCATTCTGTTTGGTTAGATGTGCTAGCTTTAAGGGTCTAAGATATCATTTGTCCTCATCACATGATCTCTTCAACTTTGAATTTTGGGTATCGGATGAATGTCAGGCCGTAAATGTGTCTGTGAAAACTGATAGCTGGAGATCTGAGATTGTTGCAGATGGTGTCGATCCAAAATTACAAACATTTTTCTTTTGTGCAAAGCCCCTTAAGCGCAGAAGACCAAAGAACCTATCTTTGAAAAATGCAAAGGATACACACCCATTGGTCTTGGAGTCCGACTTTCCTGCCGGAGACACTGATATTTTGGAGAAGGATGATGGGATTTCTACCACAAATATTTTATCACATCCTGACTCAGACTGTGTCCAATCAATATCTGAATATGATCTTGGGACACCTGCAATGCTTCAGTTTGCCAAGACAAGAAAGTTGTCAATTGAGCGTCCTGACCCACGAAACTGCGCCCTCTTGAGGAAGCGACAGTTTTTTCATTCTCACAGAGCCCAGCCAATGGAAATTGAACAAATTCTATCAGATCGAGATAGTGAGGATGAAGTTGATGACGATGTTGCAGATATTGAAGATCGAAGGATGCTTGACAATTTTGTTGACGTGAGCAAACACGAGAAAGAATTCATGCTTAAATGGAACTCATTTGTTCGGAAGCACCATGTACTGGCAGATGGTCACATTCCTTGGGCATGGGAGGCTTTCACAAAACTGCATGCCCCCGAGCTTGTTGGATCCTCCCCTATGATTTGGTGTTGGAGACTATTTATGATCAAATTATTCAATCATGGTCTTCTAGAAGCTCGTACCATAGATAAATGTGGTACTATTCTTGAACAACACCAGAAGCAGAATTTGGATCCCGAAAGCTAA 1842 0.4099 MPGFPVVARATSCHPDACERLSAEEEVAAEESLSIYCKPVELYNILQRRAIRNPSFLQRCLDYRIKAKHKKRIQMTVSLSRTVTESQTAFPLYICLARLISDLGVPEYSAVYRISRIFIFRNSPGIDSNTQVQANFTLPEVNKLAVEARSRSLFILFVSTVENSNISSGVDANLMPLDVPSFESRAREYCLYGKVSLESLYMAWDSSPNFHLGQRAEIMSTVDLLPCIMKSEFQNEDTRVSIQVPFNSENVGTSKQVQITISAEEFGAKERSPYHLYAGSEVPSSSLTHIIRLREGNVMFNYRYYNNKLQRTEVTEDFSCPFCLVRCASFKGLRYHLSSSHDLFNFEFWVSDECQAVNVSVKTDSWRSEIVADGVDPKLQTFFFCAKPLKRRRPKNLSLKNAKDTHPLVLESDFPAGDTDILEKDDGISTTNILSHPDSDCVQSISEYDLGTPAMLQFAKTRKLSIERPDPRNCALLRKRQFFHSHRAQPMEIEQILSDRDSEDEVDDDVADIEDRRMLDNFVDVSKHEKEFMLKWNSFVRKHHVLADGHIPWAWEAFTKLHAPELVGSSPMIWCWRLFMIKLFNHGLLEARTIDKCGTILEQHQKQNLDPES* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00254 613 Pfam VEFS-Box of polycomb protein 464 599 IPR019135 -
Rops6g00254 613 CDD VEFS-box_EMF2-like 477 604 - -
Rops6g00254 613 CDD ZnB-Zn_EMF2-like 287 366 - -
Rops6g00254 613 PANTHER POLYCOMB GROUP PROTEIN 21 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00254 Rops-Chr6 6053585 6090250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00254 1 605 C2H2 Transcription Factor Family AT5G51230 55.975 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00254 - - gmx:100798991 891.723