Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00238 ATGGGTAGAACCACCAGGGAGACGGTGACGTCGGCGGGTTTCTTGGCCTCGCCGCCGGTGGGTTCGTCGACCTCGCCGCCGGGAAGTTCATCGTCGAAGATCATGTCTGGTCTCTGGAAGGATCTACCCTTCAAGATTCACCACAAGGTCTCCGAGAATTGGATCAGCACCACTCTCTTGCTCGGTCCTCTCACCGGAACCTACATAAGGATAGTCCACTCTTGTCCAACACGAGACAACCAAACCAGACACACCAGCATTTCAATCTTATGCCATTCATCAACCTCAACTAACCAGATCTGA 303 0.5314 MGRTTRETVTSAGFLASPPVGSSTSPPGSSSSKIMSGLWKDLPFKIHHKVSENWISTTLLLGPLTGTYIRIVHSCPTRDNQTRHTSISILCHSSTSTNQI* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00238 100 MobiDBLite consensus disorder prediction 1 33 - -
Rops6g00238 100 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT 8 32 85 IPR020101 GO:0005750|GO:0070469
Rops6g00238 100 Pfam Cytochrome b-c1 complex subunit 8 32 74 IPR020101 GO:0005750|GO:0070469
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00238 Rops-Chr6 5806057 5808815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00238 31 68 Chloroplast and Mitochondria Gene Families AT5G05370 76.316 2.99e-17 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00238 - - sly:101267820 70.8626