Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00228 ATGGCAAAGAAAACTTGGAAGAAGCTTCCATCACTGTTCAAAACCAAGGAATTAGCACCACCACCAAGAAAACATCCATGGCAGTTCTTACCCTCTTGTGGCCATCAAAGAAGGACCCTTTCTTTCAGAGCTGATGATGAGACCTTCATCACTGTTAACTCTATCTTCTCTGACCCTTTTGATAGCACAATTGAATCGTCTAAATTTGCAAGCTTCTCCATAGACTCTGTTGATGATAATCACAACTACTATGATGATGTGGACTCTTTGGAGATGTTTGTATCACATGGGGTCATGTCAGAGAGGCTGTTTTTTGAGCCTGGCAATAGGAGTTCTTTCTTGGAGAAGACTAATTATAAGGTTGGTGGGTTTTCATTGAAGGAGAGTATAGTGTTGTTGGCTATGGAGTCTAAGGATCCATATGGGGACTTCAAGGGATCAATGGAGGAAATGGTGGAGACTCTTGGAGTAAAGGATTGGAAGGGTTTGGAGGAGCTTTTGGGTTGGTATTTGAAGGTGAATGATAAGAACAATCATGTGTTTATAATGTTGGCTTTTGTGAATTTACAAATTAGTTTAACAGCTGCTTCTGCTTCTTGTTCTTATTCCAATTCTTCATATTGCTCAGCTCTTTCATCTTTTGCTTCTTCCCCCATTGCATCAATCAGAAGGTTAGAATGA 681 0.4009 MAKKTWKKLPSLFKTKELAPPPRKHPWQFLPSCGHQRRTLSFRADDETFITVNSIFSDPFDSTIESSKFASFSIDSVDDNHNYYDDVDSLEMFVSHGVMSERLFFEPGNRSSFLEKTNYKVGGFSLKESIVLLAMESKDPYGDFKGSMEEMVETLGVKDWKGLEELLGWYLKVNDKNNHVFIMLAFVNLQISLTAASASCSYSNSSYCSALSSFASSPIASIRRLE* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00228 226 ProSiteProfiles OVATE domain profile. 133 192 IPR006458 -
Rops6g00228 226 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 67 193 IPR038933 GO:0045892
Rops6g00228 226 Pfam Transcriptional repressor, ovate 137 193 IPR006458 -
Rops6g00228 226 NCBIfam uncharacterized plant-specific domain TIGR01568 131 194 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00228 Rops-Chr6 5539603 5540283 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops6g00228 Ovate 8.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00228 - - gmx:100527123 206.453