Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00221 ATGAGCAAAAGTTCAATGGGTTTGCCCCTTTTGGGTGAGACCTTTCAGTTCTTCTCCCCCAACACTACTTCTGATATTCAACCCTTCGTTAAACAGAGAATGGAAAGGTACGGACCAATCTTCAAGACCAGCTTGGTTGGACAACCAGTTGTAGTGTCAACAGACCCGGATCTTAATTACTTGATCTTCCAAAAGGAGGGACAAATGGTTCAGAGCTGGTACCCAGATACATTCACAGAGATCTTTGGGAAACAAAGTATAATTTCCATGCATGGTTCTATGCACAAATACCTTAGGAACATGGTGCTGAATCAATTTGGCCCTGAAAGCCTTAGAAAGATGCTGTCAGAAGTTGAACAGACAGCATGCAGAACATTACAGCAGTGGTCATGTCAGGACAGTATTGAATTGAAGGAAGCAATAAAAACAATGATATTTGGTTTGACTGCAAAAAAACTTATCAGTTATGATTCCACCAAGTCATCGGAGAACTTAAAGGACAACTTTGCAGCATTTATGCAAGGACTAGTCTCGTTCCCTCTGGACATTCCAGGAACAGCCTATCACAAATGTCTGCAAGGTAGGAAAAGGGCAATGAAGATGTTGAAGAAATTGCTGCAGGAAAGACGGGAAAAGCATAGGAAACAGCAGACAGATTTCTTTGACTATGTTATTGAAGAACTTAGGAAAGAAGGAACAGTCCTCATTGAAGAGATCGCTCTAGACCTCATTTTTGCACTCCTCTTTACGAGCTTTGAAACCACTTTTCTGGCTCTGACTTATGCCATGAAATTACTCTCTGACCATCCCTTGGTGCTCAAGCAATTACAAGAAGAACATGAAGTGATTCTTAAACAACGTGAAGATCCTAATTCCGGAGTCACATGGCAAGAATACAAATCAATGACATTTACATTTCAGGTGGATCAAGAATTGCTTTTCATAAATGAAACCTTGAGACTCACAAATATAGCTCCAGTAATCTTCCGGAAGGCACTAAGAGATATTAATTTTAAGGCTTCATCCTCCACCAAGAACGCTCCTAAAGCTTCCACTGAAAGAACCCAAGGGGTTCCTGTTGTTGTGGTTATCCCTAATACACTCACACCTCAAGAGTTCATACTTGGACCTAAGAATCACGAACAACAGCTTCCAATCTGGTAG 1164 0.4107 MSKSSMGLPLLGETFQFFSPNTTSDIQPFVKQRMERYGPIFKTSLVGQPVVVSTDPDLNYLIFQKEGQMVQSWYPDTFTEIFGKQSIISMHGSMHKYLRNMVLNQFGPESLRKMLSEVEQTACRTLQQWSCQDSIELKEAIKTMIFGLTAKKLISYDSTKSSENLKDNFAAFMQGLVSFPLDIPGTAYHKCLQGRKRAMKMLKKLLQERREKHRKQQTDFFDYVIEELRKEGTVLIEEIALDLIFALLFTSFETTFLALTYAMKLLSDHPLVLKQLQEEHEVILKQREDPNSGVTWQEYKSMTFTFQVDQELLFINETLRLTNIAPVIFRKALRDINFKASSSTKNAPKASTERTQGVPVVVVIPNTLTPQEFILGPKNHEQQLPIW* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00221 387 SUPERFAMILY Cytochrome P450 6 338 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00221 387 PANTHER CYTOCHROME P450 26 4 339 - -
Rops6g00221 387 Gene3D Cytochrome P450 1 352 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00221 387 PRINTS E-class P450 group I signature 259 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00221 387 PRINTS E-class P450 group I signature 34 53 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00221 387 PRINTS E-class P450 group I signature 312 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g00221 387 Coils Coil 195 216 - -
Rops6g00221 387 Pfam Cytochrome P450 7 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00221 Rops-Chr6 5390797 5396803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00221 4 339 Cytochrome P450 AT1G12740 68.155 1.71e-170 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00221 - - gmx:100812089 533.102