Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00203 ATGGCTGGAGTCGCACCTGAGGGTTCACAATTCGATGCTCGTCAATATGGTTCCAAAATGAGTGACTTACTTTCATCTGATGGACGGGAGGACTTCTTCACATCTTATGATGAGGTCTATGATAGTTTTGATGCCATGGGCTTGCAAGAGAGCCTCCTCAAAGGCATTTACGCATATGGTTTTGAAAAGCCATCAACCATTCAGCAAAGAGGAATTGTTCCCTTCTACAAGGGACTTGATGTTATTCAACATGCACCGTCTGGAACATGGAAGGGCTGTGTAGAAGTTGGTATGACCCACTCACCTCCACGAACATGCTTGCTGGTGATATCCAGTGTGAGCGTGCTGCATGTGTTATACTATGGTGGTTTTACGGGGATGGAGGCAGTTCCAGCTCAGACCCAAGATCATGGATTCCGGCTTCCTAATTTTGCTCCTCCTCTTCCATCTCTTCCTTCCTCACTTCTACGGGTTTTTCGCAAAAATACTTGTTGTGATGTATCCTGTACACATCCTGCACCGCTGTCTGTAAGGAAGCTTGCTTCTACCGGGGAAGCTAGCCAAGAGTGCTTGCACTTATGGGAGCTGTTGGAACGTGCTATATGTGATCCACGTGTTGATTCTAGCACCATGTAG 636 0.4686 MAGVAPEGSQFDARQYGSKMSDLLSSDGREDFFTSYDEVYDSFDAMGLQESLLKGIYAYGFEKPSTIQQRGIVPFYKGLDVIQHAPSGTWKGCVEVGMTHSPPRTCLLVISSVSVLHVLYYGGFTGMEAVPAQTQDHGFRLPNFAPPLPSLPSSLLRVFRKNTCCDVSCTHPAPLSVRKLASTGEASQECLHLWELLERAICDPRVDSSTM* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00203 211 Gene3D - 31 96 IPR027417 -
Rops6g00203 211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 89 IPR027417 -
Rops6g00203 211 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 41 69 IPR014014 GO:0003724
Rops6g00203 211 PANTHER OS02G0592500 PROTEIN 155 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00203 Rops-Chr6 4639786 4640421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00203 1 91 Eukaryotic Initiation Factors Gene Family AT3G13920 72.527 2.30e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00203 K03257 - gmx:112999960 158.303