Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00200 ATGTGCCAAAGCATCCATGTTGTTACAGATGTCCCTCAAACTATTCTTCGTAGACTCTTACGGGAGCACCGATCAGAATGGACAGATAGCAGTATTGATGTTTACTCAACTGCTGCCATTAAAGCTGGTCCCTGTAGCTTGCCTGGGCCCCGAGCAGGAGTGGAGTGGATGAGCATGCAGTTGGCACCAGTGCAGAACTCATTTTTTGCTCCAATAGATGCATCTTTCTCAGATGATGCACCCGTTTTCCCTTCTGGTTTTCACATCATACCTCTTGATTCTGGCACCGAGGTTGCTGGTCCAAACCGTGCGCTGGATCTTGCTTCTGCACTTGAAGTGGGAACAAACAGGAAGCAAAGCAGCCGGTGA 369 0.4905 MCQSIHVVTDVPQTILRRLLREHRSEWTDSSIDVYSTAAIKAGPCSLPGPRAGVEWMSMQLAPVQNSFFAPIDASFSDDAPVFPSGFHIIPLDSGTEVAGPNRALDLASALEVGTNRKQSSR* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00200 122 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 68 120 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00200 Rops-Chr6 4583576 4584073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00200 7 115 Homeobox Transcription Factor Family AT4G32880 46.154 6.72e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00200 K09338 - pvy:116122390 132.494