Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00199 ATGCATACAACCTACGCATGCATGGAGGATGGAAGGACTTGGTCCAAATCCCATTGGAATCGTTGCTACTTCTCATGGTTTCCTGGAGTGGCTGCACGTGCATGCAACTTTGTGGATCTAGAACCTGCCAGGGTTGTCGAAATCCTCAAAGATAGGCCTTCATGGTATCGTGATGACCAAACCGTGGATTTTCTAAATGTGATGTCCGCTGGAAAAGGGGGAACCATCGAGCTGGTTTACATACAATTATGTGCGCCAACAACTTTGGCACCAGGACATGACTTTTGGTTGCTGCGCTACACATCTCTTTTGGAGGACGGTCGTCTTGTGGTTTGTGAAAGATCACTTAACAACACTTAG 360 0.4694 MHTTYACMEDGRTWSKSHWNRCYFSWFPGVAARACNFVDLEPARVVEILKDRPSWYRDDQTVDFLNVMSAGKGGTIELVYIQLCAPTTLAPGHDFWLLRYTSLLEDGRLVVCERSLNNT* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00199 119 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 29 118 IPR044830 GO:0003700
Rops6g00199 119 Gene3D - 14 119 IPR023393 -
Rops6g00199 119 Pfam START domain 28 118 IPR002913 GO:0008289
Rops6g00199 119 SUPERFAMILY Bet v1-like 23 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00199 Rops-Chr6 4582742 4583101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00199 29 119 Homeobox Transcription Factor Family AT4G32880 65.934 2.40e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00199 K09338 - gmx:100815727 155.221