Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00189 ATGGAGGCGGATATGGAAATTGATCATATGGTGGATATTCCTGATACCCCAGATAGATTAAATGCTAGGCATGATGATAGGAAATATGTGGGTAATCCTGAGAAGAGGGGGAGAGCTTTTCCTGTTGCTGATGAAATCAGCAGCAACTATATAACAGTGTCCCCATCAGAGAAATATTATCCTTCTCAAAATGCTCCCATCTTTAGGAGAGCCCAAACTGAGAAAGTTTTTGGACTTGGGACAACACACTCTAATGGAGCTGAAAAGATGGAGAAAGGGAAAACTATAAGCTCTAAGTTTTCTTCTAAATCATCTCGCCATGGGCCTATTTCTGTTTTAGATTTGACTGAAGAGAATGGACAGTTCCGACAACTGAAACCAGCTTGCTCACATCATGGATCCAGAGATAATGCAACTGAAGACAAGGAAGAACTGAAAGCAAGCATTGGGAACTCATCTTTACCATTCATCACTGATTCATCTGATACATCTAGAAATGTCTTAACTGGAAAGTTTAAACCAGATAACAAAACACTTCCAGCTCCTAATATATCTGTGGACCGTGGCAAGAGCATTTCTCTGTCTAATGATTCTCAATCAAAAACTGAAAGCCAAGTGTCTTTGCCTCCTCGTTTTTCCACTGCTCCAAGAGGTAGAGGGCACAAGAGATTGGTACGAAATGGGTGCATTTCGCCACAGAATATTGCAACAAGGGCAAAACAATCAGCTGAACAGAACGGCCTTCAAACCAATTATGTTGAACAGAGCCATGCTGGGCATTCAGTTTCTAGCAATACAATGTCACCGATTGGTGTTGATGATATAGTTGCTGAAGAGAGAGGTCGTGCTAGAGTGAAAGGAAAGGAAGTACTTATTCATCCTTTATCACATGGACTTAATGCCGGAACTACCCCTTTATCACAGAATATTGTGACGAGGGCAAAACAAACAGCTGAACAGAGTAGCCTTCAAACCAATTATGTTGAACAGAGCCATGCTGGGCTTTCAGTATCTAGCAATACAATGTCACCGATTAATGTTGATGATATAGTTGCTGAAGAGAGAGGTAGGGGTAGATTGAAAGGAAAGGAAGTACTTATTCATCCTTTATCACGTGGACTTAATGCTGGAACCATTCACACTGCTAGCAGCCCTATGATCAATTATGAAGAGGCCAATGGTACCAGTAATGCTTTGAGAAATTCACTTAAATACTCTGAAGGACAGGGTGGTTGGAGAACTACACATAATGGAAGCAGTCAAAATGGCAAGGATGTTCATGATTATACACCTCCACCCACTTCGCGGATCATTCCAGAGATAGACCAGTCAACTAGAACTCATCGTATTGTTGACACACTGGCTAAAAGGCAAAGGAAACGTGGATCAACTTCAGGAAATCCTAATGAAGTATCTCATAATTCTGAAATTATTTTCCTCAATTCTTCTGGGGAATCATCAGGCTCATCCCGGGGCTGTGTCTTGGATCCTGAAGTGATTGAGTTGTTATCCACACCAAGGTACACCAACAGACCTTCTGAAGATTTAGATGACAATGACAATAATAGGTTGGATGCTCGGGCAAGACAAGTAGAAGCTGATGAGATATTGGCACGTGAACTCCAAGAACAACTGTACCATGATGATTTTTTGGAAGGCAGAGGGATTGATGAACATGTAGCATGGGAGCTGCAGCATGCGGAGGATTTTCTGCATACATCTAGTGATAGTCACCATATACCTCATCCTACATGGTTTCCAAGGGCAAATAGACAGCCCCATTCACGGCCTCATCAAATTCCTTCATATAGGAGGAGAACTGTGTCTCAAGTTCCTTTCTCTAATAGAACGTCACAGTTGAGGAGTCGCATTACAAGTCGGTCATCAACACCTAACAGATCATCTAGAGGAAGACGCCCCCGGTTTCCTCTGGATATGGACTTGGACATGAGACTTGATATATTGGAAGCATTAGAGGATGCAGTAGGAGACCTTAATGATATGGGAATGGCTGATGACATCTTACATGCTCAACGTGATTTCAATGAAGATGATTATGAAATGTTATTGGCCCTTGATGAGCGAAATCACCAGCATACTGGTGCATCTGCCAATCAGATCAATAGCTTGCCGCAATTGACAACTTCACAGAGGCATGTGCTGTATGTCTTGAGACCCCAGTCAAGGGAGAAATTATTCGCCACCTTCCTTGTCTACACAAATTTCATAAAGAGTGTATTGATCCTTGGCTCCAGAGGAAAACGTCATGCCCGGTGTGCAAGTCATCTATCACCTAATTTATGTTCGAGATTTAAATGGTCAATTTATCATGCTGTGGTGTATCATCTCAGCCATCTCATTTTGTCTTTCAAGTTCTGGGATATGCATATTGAGATAACTGTTCTGAATCACTGGTGTTGTAATTGA 2427 0.4186 MEADMEIDHMVDIPDTPDRLNARHDDRKYVGNPEKRGRAFPVADEISSNYITVSPSEKYYPSQNAPIFRRAQTEKVFGLGTTHSNGAEKMEKGKTISSKFSSKSSRHGPISVLDLTEENGQFRQLKPACSHHGSRDNATEDKEELKASIGNSSLPFITDSSDTSRNVLTGKFKPDNKTLPAPNISVDRGKSISLSNDSQSKTESQVSLPPRFSTAPRGRGHKRLVRNGCISPQNIATRAKQSAEQNGLQTNYVEQSHAGHSVSSNTMSPIGVDDIVAEERGRARVKGKEVLIHPLSHGLNAGTTPLSQNIVTRAKQTAEQSSLQTNYVEQSHAGLSVSSNTMSPINVDDIVAEERGRGRLKGKEVLIHPLSRGLNAGTIHTASSPMINYEEANGTSNALRNSLKYSEGQGGWRTTHNGSSQNGKDVHDYTPPPTSRIIPEIDQSTRTHRIVDTLAKRQRKRGSTSGNPNEVSHNSEIIFLNSSGESSGSSRGCVLDPEVIELLSTPRYTNRPSEDLDDNDNNRLDARARQVEADEILARELQEQLYHDDFLEGRGIDEHVAWELQHAEDFLHTSSDSHHIPHPTWFPRANRQPHSRPHQIPSYRRRTVSQVPFSNRTSQLRSRITSRSSTPNRSSRGRRPRFPLDMDLDMRLDILEALEDAVGDLNDMGMADDILHAQRDFNEDDYEMLLALDERNHQHTGASANQINSLPQLTTSQRHVLYVLRPQSREKLFATFLVYTNFIKSVLILGSRGKRHARCASHLSPNLCSRFKWSIYHAVVYHLSHLILSFKFWDMHIEITVLNHWCCN* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00189 808 MobiDBLite consensus disorder prediction 129 147 - -
Rops6g00189 808 MobiDBLite consensus disorder prediction 151 171 - -
Rops6g00189 808 MobiDBLite consensus disorder prediction 406 438 - -
Rops6g00189 808 MobiDBLite consensus disorder prediction 454 474 - -
Rops6g00189 808 MobiDBLite consensus disorder prediction 460 474 - -
Rops6g00189 808 MobiDBLite consensus disorder prediction 188 211 - -
Rops6g00189 808 MobiDBLite consensus disorder prediction 1 36 - -
Rops6g00189 808 MobiDBLite consensus disorder prediction 406 428 - -
Rops6g00189 808 MobiDBLite consensus disorder prediction 574 642 - -
Rops6g00189 808 MobiDBLite consensus disorder prediction 602 636 - -
Rops6g00189 808 MobiDBLite consensus disorder prediction 127 222 - -
Rops6g00189 808 MobiDBLite consensus disorder prediction 81 108 - -
Rops6g00189 808 Coils Coil 807 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00189 Rops-Chr6 4411463 4421327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00189 520 715 C3H Transcription Factor Family AT1G04790 39.623 3.66e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00189 - - aprc:113872307 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00189 6 4411463 4421327 Rops6g00189 6 4411463 4421327 ECH