Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00150 ATGGTTGCTGTTGACAAGAAAAACTCATTAAATATGGAACAAAATGATCATGATTTGGACCTAGAACTGATGCCACCATTGACTGAGAAAAAGAAGCCAGGTGGTGGGTGTTCTTGTGATTCCCTTCAGTTGAGACTTAAGAGGGACACACCTATTCATGTTGACATTGTTAGTGGTGGCTTTATTGCTCCTTTCCTTTATCTAGAACTAGAATGGAATTTGAGGCTTCCATTGGTGAAGAGCATAAATGTTAGTGGCCACAAGTACGAGCTTGTTTCACAAGTACGGGTTATAGAGAAGAAAGGACCAATGTTTCTATCGATGTCAACACTACTAGCTCTGATCATGACCATCTTCTCCTATGCAATTCTCTTGGGGGAGATAATTAGTTTGGGAAGCTTTTTTGCCCATCCAGTTTCCACTTTGGAATTGGGATTGATACCAAAGGAGACGCGCAACCTTCGTTCAATGGACATTTATCAGAATATATTCATGATTGCTTTCATGGAAAGCTTTTATACATTTATATTCAATTTTGGTGACACCACATACACCAAGGTGTTTGTTGGAGGGTTGGCTTGGGAGACTCAAAAGGAGACCATGAAGAAGTATTTTGAGCAATTTGATGAGATCTTGGAGGTTGTTGTCATCACTAACAAAGCCACTAGAAGATCTAAAGGCTACGAATTTTTACTTTTTGTGAACCAGAAGCTTCTATGA 720 0.3944 MVAVDKKNSLNMEQNDHDLDLELMPPLTEKKKPGGGCSCDSLQLRLKRDTPIHVDIVSGGFIAPFLYLELEWNLRLPLVKSINVSGHKYELVSQVRVIEKKGPMFLSMSTLLALIMTIFSYAILLGEIISLGSFFAHPVSTLELGLIPKETRNLRSMDIYQNIFMIAFMESFYTFIFNFGDTTYTKVFVGGLAWETQKETMKKYFEQFDEILEVVVITNKATRRSKGYEFLLFVNQKLL* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00150 239 Gene3D - 180 238 IPR012677 -
Rops6g00150 239 PANTHER BOULE-RELATED 175 236 - -
Rops6g00150 239 SUPERFAMILY PLP-dependent transferases 46 92 IPR015424 -
Rops6g00150 239 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 185 239 IPR000504 GO:0003723
Rops6g00150 239 Gene3D - 36 94 IPR015421 GO:0003824
Rops6g00150 239 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 187 236 IPR000504 GO:0003723
Rops6g00150 239 SUPERFAMILY RNA-binding domain, RBD 176 236 IPR035979 GO:0003676
Rops6g00150 239 Pfam Pyridoxal-dependent decarboxylase conserved domain 47 93 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00150 Rops-Chr6 3724586 3731503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00150 49 92 Calmodulin-binding Proteins AT2G02010 86.364 2.01e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00150 - - cill:122302324 100.908