Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00148 ATGCACTCTCACGTTGAACTCGCATGCAAGCCACTCTCTGAGCAACAGGTTAGAGATTTATGTGAGAAGGCTAAGGAGATTTTAATGGATGAAAGTAATGTCCAGCCTGTGAAAAGCCCTATGACAAGTTGTGGTGGTATTCATGGGCAGTTTCATGATCTTGCTGAACTATTTCGAATTGGTGGGAAGTGTCCAGATACAAACTACTTGTTTATGGGTGATTATGTGGACCGTGGTTATTATTTAGTTGAGACTGTAACACTCCTCGTGGGCCTCATCGCGGTGATCGTCGTGGGGGTTTTAGCAATGGTGGTGTTCACAACGCCCTCATGCCAACTTCACGTCCCAGTATCGAGGGAGGAGAGAGCCTTCGTTGACTTGATGGCTTGTCCACAGTTGGAGTCCTTGGAGCTGCATGAGGTAAGTCAGGACTTTGCAGTAGACGTGGAGAGGGTAAGGGATGCAGGAGTGCTGAAGGGCAAGTGGGGTTGTGCATCTTCCATGGTGGTGGACGATGCTGTCAGTACCAGGGATGCACAAGGGAACACTATGTTTTACAAAGGCTCATGGTGA 573 0.4834 MHSHVELACKPLSEQQVRDLCEKAKEILMDESNVQPVKSPMTSCGGIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYLVETVTLLVGLIAVIVVGVLAMVVFTTPSCQLHVPVSREERAFVDLMACPQLESLELHEVSQDFAVDVERVRDAGVLKGKWGCASSMVVDDAVSTRDAQGNTMFYKGSW* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00148 190 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 8 92 IPR047129 GO:0004722
Rops6g00148 190 SUPERFAMILY Metallo-dependent phosphatases 7 92 IPR029052 -
Rops6g00148 190 Gene3D - 1 95 IPR029052 -
Rops6g00148 190 SMART pp2a_7 12 175 IPR006186 GO:0016787
Rops6g00148 190 PRINTS Serine/threonine phosphatase family signature 69 96 IPR006186 GO:0016787
Rops6g00148 190 PRINTS Serine/threonine phosphatase family signature 40 67 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00148 Rops-Chr6 3691714 3700864 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00148 45 90 Calmodulin-binding Proteins AT5G63870 48.936 1.11e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00148 K04382 - gmx:100775812 153.295