Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00145 ATGGCTTCACCAACTGTGCTATCAGGTTTTGCATGTTATAATGTAACACTGGATTTTTCCAACAGAATCTGGATGGGTGATGATGTCCTTTTAAAACGTGTTCCTCTTTTGTGTATCCAACTTGCCTACAATATTCTGGCTTCTCGTTTATTGTACTACATCCTCAGGCCCCTCCATGTGCCTGTTATTGCTGCACAGATCCTTGCTGGTACAGTTCTGAGTCAATTTGGCTTGGGAAGATTCGAAGCAGTATTTGACATGGTTTACAGTCAAGAAGGAATCCTAGCCGTTGAAACCTTTGCAAACATGGGAATCATGTACTATGTGTTCCTTAGTGGGTTGGAGATGAATTCAAACACCCTCATAGGATCAAATAAGAAGGCTAAAAGCCTTGCCATTGGTGGCATTGTAATTCCAATGTTGTTGGGGATTGGCATTCTTGCTCTAATACGTGGAATTGAACCCGAGTCACAAAAGGCATCTAAACCTAGTGAAGGGTATTTGTTCTGGTGTTTAATTCTTGGTGTCACAGGTTTCCCTGTCCTTGCTCGAATCCTTGCTGAGCTCAAACTCTTGTATACAAGGCTAGGCAAAGATGCTTTGGCAGCAGCTGTGTTGATGGATGGATATGGTTGGGTTTTGTTCACATTGTTGATTCCTTTTTCCAATGGTGGTAATAGACCATACCTCTCAGCATTTTCTACAATATTGTTCATCATTTTCTGTTTCTGTGTGATTCGTCCTATCATTACTCCCATGATTGAAAGCAAAACCAAAAAGGAGATATGGCACAAATCACAAGTGTTGGATGTGTTGATGGGCCTGTTTGTTTTTGCATATATTACAGATTTTCTTGGCACACACCACATTGTTGGGGCTTTTCTGTATGGACTAATCTTACCTCATGGGAAGTTTGCTGATTTGGTGATGGAAATGTCGGATGATTTTGTTACCAGTGTTATATGCCCTATCTACTTTGCTGGTTTTGGCTTTAGACTCAACATGAACTTGATTACAGAGAATGGAAATCCGGTTATGCTGTTTGTGTTGATTGTGTTGTTAACCATACCAAAAGTTCTGAGCTCTTTATTAGTCACTTTCTTCTTTGGATTGCCTGCACGAGATGGCGTGGCCATTGGATTTCTTCTGAACACCAAGGGCATCATGGCAGTGACACTACTGAGCATTGCTTGGAGCAAAGGAATTTTGGAGCCATATGCATACACTATTATGATGTTAGCTATTATATTCATGACTCTGCTGGTCTCTCCCATGATCAATGCTGTATACAAGCCAAAATTTAGATTCATGCAGTCCCAGCTAAGGACTGTGCAGAAGCTAAGGTTTGATGCTGAACTTAGAATTGTGGCTTGTGTCCACAATGCTTGCCAAGCCAAGGGAATGACCCGGGTCCTTGAAGCCATAAATGCCACAAGACTTTCACCTATACATGTCTCAGTCCTTCACCTTGTTGAACTTACTAGACATGGCACTGCTCTTCTTGTTGCCCAAATAGACCATTCAAGTTCCAGTGTGGCAGCAGAAAACCTTTCTGGATCAGAAGCTGTGTTTGAGAGCATAACCAATGTGTTCAAAGAATTTGTAAACGTCTATAATGCTGTTAGATTTGACTCATCCAGTGCTGTGTCAACCTATGCAACTATCCATGAAGACATATACAGTGTATCAGAAGAGAAAGGTGCAAGCCTAATTCTCCTTCCCTTTCACAAACAGCTATCTTCAGATGGTGCTCTAGAAATAACCAACAATGCACACTGTGACATAAACAATAATGTTCTAGAACAAGCACCTTGTTCTGTAGGGGTCTTTGTGAACCGTGGACTTGGATCATTGTTACAAACAAAATTGAAAATCATTATGCTATTCATAGGAGGACCTGATGACCGTGAAGCCTTATCTATTGCATGGAGAATGGCAGGACATTCAGGAACACAGTTGTATGTGATGAGGATTCATTTGTTAGGTGAAGAACAAGAAGATGAATCAACAAGTGATGCCGAAGAGATGTTTTCTACAGTAATGGACAATGTGGTGCAGAAAGAGTTGGATGATGAGTGCATATTTTCCTTCCGGCACAAGGCAGTGAACAATAATGATTCCATATCTTACTCAGAGAAGAAAGTGGAAATAGAAACAGGTGAGGAGATTCCTGTGCTCCTAAATGAAATAGATAAACCTGGCTACGATTTGTACATTGTTGGACAAGGGAGTGGTAAGAACTTCACAGCTTTTAAGATTTTGTTACAATGGTGTGACAGCCCTGAACTAGGGGTTATAGGGGACATAGTAGCTTCAACCAGTTTTGGCACACACTCTTCATTGCTTGTTGTGCAGCAATATTTGCAAGGGAGAAAGCGTAAACCTAAATGTCCCGGACGAAGTTCTGAAAGGAAATGTGGTTCTCAGACGATGGTGTAA 2439 0.4121 MASPTVLSGFACYNVTLDFSNRIWMGDDVLLKRVPLLCIQLAYNILASRLLYYILRPLHVPVIAAQILAGTVLSQFGLGRFEAVFDMVYSQEGILAVETFANMGIMYYVFLSGLEMNSNTLIGSNKKAKSLAIGGIVIPMLLGIGILALIRGIEPESQKASKPSEGYLFWCLILGVTGFPVLARILAELKLLYTRLGKDALAAAVLMDGYGWVLFTLLIPFSNGGNRPYLSAFSTILFIIFCFCVIRPIITPMIESKTKKEIWHKSQVLDVLMGLFVFAYITDFLGTHHIVGAFLYGLILPHGKFADLVMEMSDDFVTSVICPIYFAGFGFRLNMNLITENGNPVMLFVLIVLLTIPKVLSSLLVTFFFGLPARDGVAIGFLLNTKGIMAVTLLSIAWSKGILEPYAYTIMMLAIIFMTLLVSPMINAVYKPKFRFMQSQLRTVQKLRFDAELRIVACVHNACQAKGMTRVLEAINATRLSPIHVSVLHLVELTRHGTALLVAQIDHSSSSVAAENLSGSEAVFESITNVFKEFVNVYNAVRFDSSSAVSTYATIHEDIYSVSEEKGASLILLPFHKQLSSDGALEITNNAHCDINNNVLEQAPCSVGVFVNRGLGSLLQTKLKIIMLFIGGPDDREALSIAWRMAGHSGTQLYVMRIHLLGEEQEDESTSDAEEMFSTVMDNVVQKELDDECIFSFRHKAVNNNDSISYSEKKVEIETGEEIPVLLNEIDKPGYDLYIVGQGSGKNFTAFKILLQWCDSPELGVIGDIVASTSFGTHSSLLVVQQYLQGRKRKPKCPGRSSERKCGSQTMV* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00145 812 PANTHER CATION/H + ANTIPORTER 12 787 - -
Rops6g00145 812 Gene3D - 36 436 IPR038770 -
Rops6g00145 812 MobiDBLite consensus disorder prediction 793 812 - -
Rops6g00145 812 Pfam Sodium/hydrogen exchanger family 45 427 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00145 Rops-Chr6 3651657 3654852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00145 4 805 Antiporter Super Family AT2G13620 35.165 1.17e-162 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00145 - - gmx:100792990 1003.82