Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00119 ATGGCAACCGAAGCAGTAGTTGAAGAAGGGTTTGAGGCGCCGAAAGAGACGGAGACGGAGACGGAGGCGCCGGCGCCGGTGCCGGAGACGGGGTTGAAGCACAATTTGGAAAGGAAGTGGACCTTCTGGTTCGACAACCAATCGAAACCAAAGCAAGGTGCTGCTTGGGGAACCTCTCTTCGCAAAGTTTACACCTTCGATACCGTTGAGGAGTTCTGGTGTTTGTATGATAATATATTCAAGCCCAGCAAGTTGCCTGGCAATGCGGATTTCCACTTGTTCAAGGCTGGGATTGAACCAAAGTGGGAAGATCCTGAGTGTGCCAATGGAGGAAAGTGGACTGTCGCCAGCAACAGAAAGGCCAACCTTGATACCATGTGGCTTGAAACTTTGATGGCTTTGATTGGGGAGCAATTTGAGGACGCCGAGGACATATGCGGCGTGGTGGCGAGTGTGCGCCAGTGGCAGGATAAGCTTTCATTGTGGACAAAGACTGCAGCAAATGAGGCTGCCCAGATGAGCATTGGAAGGAAGTGGAAGGAAATCATTGATGTTACTGACAAGATGACATACAACTTTCATGAAGATGCTAGAAATCGAGGTGCAAAGGCTCGATACACAGTATGA 627 0.5008 MATEAVVEEGFEAPKETETETEAPAPVPETGLKHNLERKWTFWFDNQSKPKQGAAWGTSLRKVYTFDTVEEFWCLYDNIFKPSKLPGNADFHLFKAGIEPKWEDPECANGGKWTVASNRKANLDTMWLETLMALIGEQFEDAEDICGVVASVRQWQDKLSLWTKTAANEAAQMSIGRKWKEIIDVTDKMTYNFHEDARNRGAKARYTV* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00119 208 FunFam Eukaryotic translation initiation factor 4E 26 208 - -
Rops6g00119 208 Pfam Eukaryotic initiation factor 4E 36 192 IPR001040 GO:0003723|GO:0003743|GO:0006413
Rops6g00119 208 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 14 198 IPR001040 GO:0003723|GO:0003743|GO:0006413
Rops6g00119 208 Gene3D RNA Cap, Translation Initiation Factor Eif4e 29 208 IPR023398 -
Rops6g00119 208 ProSitePatterns Eukaryotic initiation factor 4E signature. 90 113 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Rops6g00119 208 MobiDBLite consensus disorder prediction 1 30 - -
Rops6g00119 208 SUPERFAMILY eIF4e-like 8 203 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00119 Rops-Chr6 3201164 3206371 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00119 23 208 Eukaryotic Initiation Factors Gene Family AT5G35620 66.321 2.50e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00119 K03259 - gmx:100499799 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00119 6 3201164 3206371 Rops6g00119 6 3201164 3206371 ECH