Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00089 ATGGCTGGAGAACTAGGGGTCCTAAATGCTCTTGATGTAGCCAAGACACAATGGTACCATTTCACTGCAATTGTGATAGCTGGAATGGGCTTCTTCACTGATGCCTATGATCTCTTTTGCATTTCCCTTATCACCAAGTTGCTGGGGAGGATATATTACACAGAACCAAATGCACCAAAGCCAGGAGTTCTTCCTCCTAGTGTTCAAGCTGCTGTGACTGGTGTTGCACTATGTGGAACATTAGCTGGTCAACTATTCTTTGGTTGGCTTGGTGACAAAATGGGAAGAAAAAAGGTCTATGGTTTAACTCTTATTCTCATGGTAGTGTGTTCAATTGCCTCAGGGCTATCTTTTGGATCAAGTGCAAAGGGTGTCATGGCCACACTGTGTTTCTTCAGGTTTTGGCTTGGATTTGGGATTGGTGGTGACTACCCTCTTTCGGCTACAATCATGTCTGAATATGCAAACAAAAAGACTAGAGGGGCATTCATAGCTGCAGTGTTTGCTATGCAAGGATTTGGAATCTTGGCTGGTGGAATAGTAGCCTTGATTGTCTCATCTATTTATGACCACAAATACAAGATTCCTACTTATGAAGAAAATCCAGCAGCATCATTGGTACTACCTGCATTTGATTATGTTTGGCGTATTATTCTAATGTTTGGTGCATTACCAGCAGCACTTACCTATTACTGGCGTATGAAAATGCCTGAGACAGCTCGTTACACAGCACTTGTTGCAAAGAATGCAAAACAAGCTGCTGCAGACATGTCTAAGGTGTTGAAAGTTGAAATTGAAGCTGAAGAGGAGATGGTAAACAAAATGACACAAGCTAAGAGCCATAAGTATGGTTTGTTCAGCATGGAATTTGCCAAACGCCATGGCTTGCATTTGTTGGGAACCACTAGCACTTGGTTCTTATTGGACATAGCATTCTATAGCCAGAACCTATTCCAAAAGGACATTTTCACTGCAATTGGATGGATCCCTCCAGCAAAGGAAATGAATGCAATGCATGAGGTTTATAAGATTGCAAAAGCACAGACACTTATAGCACTTTTGAGTACCGTGCCAGGTTATTGGTTCACAGTAGCATTGATAGATTACATGGGCCGTTTTGCTATCCAATTGATGGGTTTCTTCTTCATGACTGTCTTCATGTTTGCGTTGGCTATACCATATGATCATTGGACCAAGAAAGACAATAGAATTGGGTTTGTTGTTATGTATTCCCTCACCTTCTTTTTTGCCAATTTTGGTCCAAATGCTACCACATTTGTTGTGCCAGCTGAGATCTTCCCAGCAAGGCTAAGGTCTACTTGTCATGGAATCTCAGCAGCTGCAGGAAAAGCAGGTGCAATTGTGGGAGCATTTGGATTCTTATATGCTGCACAAAGTAAGGACCCTTCTAAGACTGATGCAGGGTACCCAACTGGTATTGGTATTAAGAACTCACTCATTATGCTTGGTGTGATCAACTTTGCTGGGATATTATTCACCTTTTTGGTTCCAGAATCAAATCAGAAATCATTGGAGGAGTTGAGTGGGGAGAATGAAGATGGTGATGAGGCCATTGAGGAAGCAGGGTCTGCTAGGACTGTTCCAGTTTGA 1611 0.4221 MAGELGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLITKLLGRIYYTEPNAPKPGVLPPSVQAAVTGVALCGTLAGQLFFGWLGDKMGRKKVYGLTLILMVVCSIASGLSFGSSAKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSIYDHKYKIPTYEENPAASLVLPAFDYVWRIILMFGALPAALTYYWRMKMPETARYTALVAKNAKQAAADMSKVLKVEIEAEEEMVNKMTQAKSHKYGLFSMEFAKRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFTAIGWIPPAKEMNAMHEVYKIAKAQTLIALLSTVPGYWFTVALIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWTKKDNRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPSKTDAGYPTGIGIKNSLIMLGVINFAGILFTFLVPESNQKSLEELSGENEDGDEAIEEAGSARTVPV* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00089 536 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 513 - -
Rops6g00089 536 NCBIfam phosphate:H+ symporter 10 517 IPR004738 GO:0005315|GO:0006817|GO:0016020
Rops6g00089 536 Pfam Sugar (and other) transporter 24 514 IPR005828 GO:0016020|GO:0022857|GO:0055085
Rops6g00089 536 CDD MFS_PhT 24 506 - -
Rops6g00089 536 FunFam Inorganic phosphate transporter 1-6 19 529 - -
Rops6g00089 536 Gene3D MFS general substrate transporter like domains 269 531 IPR036259 -
Rops6g00089 536 Gene3D MFS general substrate transporter like domains 19 267 IPR036259 -
Rops6g00089 536 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 508 IPR020846 GO:0022857
Rops6g00089 536 MobiDBLite consensus disorder prediction 512 536 - -
Rops6g00089 536 SUPERFAMILY MFS general substrate transporter 11 515 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00089 Rops-Chr6 2218517 2220127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00089 4 519 Inorganic Solute Cotransporters AT5G43360 81.008 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00089 K08176 - gmx:100795623 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03095 8 68725839 68728877 Rops6g00089 6 2218517 2220127 PCT