Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00084 ATGGGCAATATGACCTACCACCTTGAACTATTAGCATTCTTCCTGACTGAGAAACTGCAGCTTTCAACCCTGCAAAGGGTTGGTGCTCAGCTCCCAGATGAAGATGACTGCTGTTATTGTACATCAAAGCTTTTTGGAAGAGTTGGAACTGTTGCACTGCTTGCCTCTGGAGATGTCTCCAACTGTCCTGTTGGAGCTAGGCCTGGGCAAAAAATCTGTGCTTTCGTCTCAGATCTGCGTTCTTCTTCTTTAGCACATTCTTCACTCTTTGTTGATTTGAATCACTGTGGATCCAGTGCTTTCGGTACCAAAAATCTTCTCCTGGATAAGGTAGAACAAGTTGCATTTGGTCACTTCCATTTTCTTTCCTCTTTCTTCTCTGTTTCAAGCACCTCATTCAACACTTGGTTAGGGAAGAGAGAGGAATGGTTCCGAGACTTCATTAGTTCTATTTTGGCACTGATAGGAACCCACAAAGCTGTTGATTTTAGAAGTAGTCAGAACCTCATTCCACCTGCAGTAAAGGTATATGATGAGTTGTACCAAGCAGCACTGAATGAGATCGTAGAGGTGTTGACGTCGGTGTGCAAGACACACAATTTGCCTTTAGCTCTAACTTGGGCCCCTTGCATCCAACAAGGAAAGTGTGGGTGTGGGGTTTCTACTGAGAATTATGTGTGCTGCGTCTCCACAGTGGATTCTACATGTTATGTGGCGGATCTAGACATATTGGGATTCCAGGAAGCTTGTTCTGAGTATCACCTTTTCCGTGGACAAGGAATAGTTGGCACAGCCTTCACAACAAGCAAACCATGTTTCGCTATTATTGATATAATCGCCTTTAGTAAAGCTGAATATCCTTTGGCTCATCATGCAAAGATGTTTGGGTTGCATGCCGCTGTGGCCAGTCCTTTGAGTAGTGTCTACACTGGACCAGCTGAGTTCGTATTGGAGTTTTTTCTACCAAAGGACTGCCATGACAGCGAAGAGCAGAAACAGATGCTGAACTCACTGTCCATAGTGTCACGAGTAGAAGCAGAATCATCATGGATTGCACATATGATGGAGGCCCAACAGAAGGGGAAAGGCGTGTCTGTATCAGTGGAATGCCTGGAAGAGCCAAAGGAAGAGTTCAAAGTGACAACCAGCTGGGAAGGCATTGATCAGGCACAGGAGCAGGTGTTTTCAGATTTTGGGCAAATGGAGCAAAGTTAA 1215 0.4494 MGNMTYHLELLAFFLTEKLQLSTLQRVGAQLPDEDDCCYCTSKLFGRVGTVALLASGDVSNCPVGARPGQKICAFVSDLRSSSLAHSSLFVDLNHCGSSAFGTKNLLLDKVEQVAFGHFHFLSSFFSVSSTSFNTWLGKREEWFRDFISSILALIGTHKAVDFRSSQNLIPPAVKVYDELYQAALNEIVEVLTSVCKTHNLPLALTWAPCIQQGKCGCGVSTENYVCCVSTVDSTCYVADLDILGFQEACSEYHLFRGQGIVGTAFTTSKPCFAIIDIIAFSKAEYPLAHHAKMFGLHAAVASPLSSVYTGPAEFVLEFFLPKDCHDSEEQKQMLNSLSIVSRVEAESSWIAHMMEAQQKGKGVSVSVECLEEPKEEFKVTTSWEGIDQAQEQVFSDFGQMEQS* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00084 404 PANTHER PROTEIN NLP8 159 357 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00084 Rops-Chr6 2081234 2085014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00084 159 386 NLP Transcription Factor Family AT4G35270 45.035 1.08e-66 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00084 - - lang:109359605 347.436