Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00024 ATGGGATTGAAGGGGCAGATTATAAGCTTAAGCAGCAGCACTCATTGGTGTCTAGCGTCAACTCACTTCCCCCGATATTCTTCTATTTCTCTCCCTCTTCCTTCAAATTATTTATCACCTTCCACTTCCACGCTCAAAACTAGAACCACAACACCACCACTCTTTTCTCTCATTCCCAAAAGATTTTCAGCCATGGATAATCGAAAAGGTGGATTAGACGAAGTGACAGAACAGGAATATGCACTTCACTCTAACTTACTTCAACAATTCACTTCCATCTCCACCATCGACAAGGCATGGCTTTTTAAATCTCACTCTGGCTCAGCTTCTTCTCAGGGAATGTTTTGTGTCAGTCAACCAAACCTTTTGGCCAACAAGAGAAGGAAGTTCATTCTGTCCTCTACCATTTCCAAACAAACTGATGGCTCTGTCACATTTCAGTGGGCTCCATTTCCCATTGAGATGTCTGGTGTCAATGCATTGGTCCCCTCCGCTTCTGCTTCCAAACTTCTAATTGTTCGAAATCCAGAGAATGAAGGTCCTACCCGCTTTGAAATTTGGAGCTCCTCTCACCTTGAAAAGGAGTTCTGTATCCCTCAGTCCAAGCACGGTTCAGTTTACACTGATGGATGGTTTGAGGGAATCTCTTGGAACTCGGATGAAACTCATATAGCATATGTTGCTGAAGAGCCATCCCCAGCAAAGCCCACATTCAATGATCTGGGCTACAAGAAAGGTGGTGCTTCTGAAGATAACAAGGATTGTGGAACCTGGAAAGGTCAAGGGGATTGGGAGGAGGACTGGGGAGAAACATATGCCGGGAAGAGGCAGCCTGCGCTTTTTGTCATAAACATCACTAGTGGTGAGGTACAAGCTGTCAAAGGAATTGACAAATCTTTGAGTGTTGGCCAAGTTGTATGGGCTCCATCAAGTGAAGGCTCTGCACAATATTTGGTTTTTGTCGGATGGTCATTTGAGACGAGAAAACTTGGTATTAAGTACTGCTATAACAGGCCTTGTGCATTATATGCCATCAAAGCACCACAGGAGTCAAAAACTAATGAAACTGAGATTCACTCCACTGAAGATGTTCAGGCACTTAACCTAACTCAAACCATCAGTAGTGCTTTCTTTCCACGGTTCAGCCCAGATGGAAAGGTTCTTGTATTTTTATCTGCAAGAAGTTCAGTTAAATCTGGAGCCCATTCTGCTACAAATTCACTTCATAAAATTGACTGGCCTAGGGATACAAATTTATATCAATCTGCAAAAGTTCACGATGTGATTCCAGTTGTGCTCTGTGCTGAGGATGGCAGCTTCCCTGGGCTTTACTGTTCAAGTATCCTTAGTGATCCATGGCTTTCTGATGGCTATACTTTGATTATACCCTCAATCTGGCACAGCAGTCAAGTTTTACTGTCTGTCAATGTGTTGAGTGGAGAAATATCACGTATCTCCCCTGCTGACTCAAATTTCTCTTGGAGTCTCCTTACACTGGATGGGAACAATATTCTTGCTGTTTCTAGCAGTCCAGTAGATGTTCCTCAAGTCAAGTATGGAACCATTATTGAGAAGGCAGCTGGTAATGAATGGAGTTGGTCTGATGTATCAAATCCCATATTTAAATGCTCTGACAAGGTTAGATCTTTGTTATCCTCTCTTACAGTCAGTGTAATGAAGATCTCAGTCAAGGATGCTTCTGAAAACTCAACAAAAGGTGCTAATAAACCTTATGAAGCTATATTTGTGTCATCAAAAACTAAGAACAGTGATGTGTGTGATCCACTGATTGTGGTTCTTCATGGGGGACCACACTCCGTTTCATTGTCAAGCTTTTCAAAGTCATTGGCTTTTCTTTCTTCACTTGGATATAGCTTGTTGATTGTGAACTACAGAGGTTCATTGGGATTTGGTGAGGAAGCCTTACAATCTCTTCCAGGGAAAGTTGGATCTCAGGATGTCAATGATGTACTCACTGCTATTGATCATGTTGTAAACTTGGGACTTGCCAGTCCATCAAAGATTGCAGTGCTCGGTGGTTCACATGGAGGTTTTCTGACAACCCACTTGATTGGCCAGGCACCAGAGAGGTTTGTTGCGGCAGCTGCTAGAAATCCTGTATGTAACCTGGCACTGATGGTTGGTACATCCGATATCCCTGATTGGTGCTTTGTGGAAACCTATGGAACCAAGGGCATAGATAGGTTTACTGAAGCACCTTCAGCAGAGGATCTGACTGTGTTTTATAGCAAGTCTCCCATCGCACACCTATCAAAGGCAAAAACACCAACAATTTTTCTATTAGGTGCCCAAGATCTTCGTGTTCCAATTTCAACTGGACTGCAATATGCTCGGGCTTTAAAGGAGAAAGGAGTACAGGTTAAAGTTATTGTGTTTCCAAATGATGTTCATGGAATTGAAAGGCCACAATCTGACTTTGAAAGCTTCCTTAACATTGGGGTGTGGTTCAACAAGTATTGCAAATGA 2487 0.4274 MGLKGQIISLSSSTHWCLASTHFPRYSSISLPLPSNYLSPSTSTLKTRTTTPPLFSLIPKRFSAMDNRKGGLDEVTEQEYALHSNLLQQFTSISTIDKAWLFKSHSGSASSQGMFCVSQPNLLANKRRKFILSSTISKQTDGSVTFQWAPFPIEMSGVNALVPSASASKLLIVRNPENEGPTRFEIWSSSHLEKEFCIPQSKHGSVYTDGWFEGISWNSDETHIAYVAEEPSPAKPTFNDLGYKKGGASEDNKDCGTWKGQGDWEEDWGETYAGKRQPALFVINITSGEVQAVKGIDKSLSVGQVVWAPSSEGSAQYLVFVGWSFETRKLGIKYCYNRPCALYAIKAPQESKTNETEIHSTEDVQALNLTQTISSAFFPRFSPDGKVLVFLSARSSVKSGAHSATNSLHKIDWPRDTNLYQSAKVHDVIPVVLCAEDGSFPGLYCSSILSDPWLSDGYTLIIPSIWHSSQVLLSVNVLSGEISRISPADSNFSWSLLTLDGNNILAVSSSPVDVPQVKYGTIIEKAAGNEWSWSDVSNPIFKCSDKVRSLLSSLTVSVMKISVKDASENSTKGANKPYEAIFVSSKTKNSDVCDPLIVVLHGGPHSVSLSSFSKSLAFLSSLGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVVNLGLASPSKIAVLGGSHGGFLTTHLIGQAPERFVAAAARNPVCNLALMVGTSDIPDWCFVETYGTKGIDRFTEAPSAEDLTVFYSKSPIAHLSKAKTPTIFLLGAQDLRVPISTGLQYARALKEKGVQVKVIVFPNDVHGIERPQSDFESFLNIGVWFNKYCK* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00024 828 Pfam Prolyl oligopeptidase family 611 827 IPR001375 GO:0006508|GO:0008236
Rops6g00024 828 Pfam WD40-like Beta Propeller Repeat 376 399 IPR011659 -
Rops6g00024 828 ProSitePatterns Prolyl endopeptidase family serine active site. 656 686 IPR002471 GO:0004252|GO:0006508
Rops6g00024 828 SUPERFAMILY DPP6 N-terminal domain-like 206 513 - -
Rops6g00024 828 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 73 827 - -
Rops6g00024 828 Gene3D alpha/beta hydrolase 572 826 IPR029058 -
Rops6g00024 828 SUPERFAMILY alpha/beta-Hydrolases 595 827 IPR029058 -
Rops6g00024 828 FunFam Acylamino-acid-releasing enzyme 567 827 - -
Rops6g00024 828 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 76 349 IPR045550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00024 Rops-Chr6 739127 750116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00024 595 811 Carbohydrate Esterase AT5G36210 28.111 5.67e-19 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00024 K01303 - gmx:100803600 1293.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g00024 6 739127 750116 Rops6g00024 6 739127 750116 ECH