Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g00023 ATGTCACTGGAAGAAGATGAAAAAGAAGACTATGCTTCTCTCTCTGACTTACTTCAACACTTCACCACCATTCCCAACATTGACAAGGCATGGCTTTTTAAGTCAGACAACAATAGTAAACTGGGAATGTTTTCTATTTCTCAACCAAATCTTTTAGCAAACAAGAAGAGGACATTCATCCTGTCCTGTGACATTCTTAAAGAAAGTGATCGTTGTGTTAAGTTCGTGTGGGATCCATTTCCAATAGAGATGTCTGGGGTGTCTATGATTGTTCCATCCCCTTCTGGCTCTAAACTTCTAGTGATTCGAAATCCCGAGAATGAAGAAGCCCCTACTCGCTTTGAGATTTGGAGTTCATCTCACTTGGAGAAGGAGTTCCATATCCCCCAATCACTCCATGGCTCCGTATATAATGATGGATGGTTTGAAGGAGTCTCTTGGAACTTGGATGAAACATTGATAGCATATGTAGCAGAAGAGCCCTCTCCTGCAAAGCCCATGTTTAATAATCTGGGCTACAAGAAAGATGGTGGTAGTGCTGACAAGGATTTTGGCAGCTGGAAAGGTCAAGGGGACTGGGAGGAGGATTGGGGAGAAACGTACGCGGGAAAGAGAACACCTACACTTTTTGTTATCAACATCAACAGTGGAGAGGTACAAGCTGTCAAAGGAATTGACAAATCTTTGAGTGTTGGCCAAGTTGTTTGGGCTCCATTTATTGAGGGCTCAGAACAATATCTTGTTTTTGTCGGATGGTCATCTGAGACAAGAAAGCTTGGTATTAAGTACTGCTCAAACAGGCCTTGTGCATTATATGCTGTTAGAGCACCGGATCATGAGTCAAAGTCCGAGCAACCAGAGCACCGCTTAACCGACGAATTGCATGCACTGAAACTTACTCCAACCATAAGCAGTGCCTTCTTTCCGCGATTCAGCCCAAATGGGAAGTTCCTTGTGTTTTTATCTGCAAGAAGTGCCGTGGATTCTGGAGTGCACAATGCTACAAATTCACTTCATAGAATTGATTGGCCAACTAATGAAAAACTGTACCAATCTGCCAAAGTTTATGACATTATTCCTGTTGTGATGTGTGCTGAGGATGGTTGCTTCCCTGGGCTTTACTGTACAACTATCCACAATAATCCTTGGCTTTCTGACAACTGCACAATGATCATATCATCGATCTGGCACAGCACTGAAGTTCTACTCTCTGTGAATGTATTGAGCGGGAAAATATTACATATCAGCCCAGCAGATTCAATTTTCTCGTGGAATCTTCTTATGCTGGATGGGAGCAATATTGTTGCCATTTCTAGCGGTCCAGTCGATGTTCCTCAAATAAAATATGGAATGGTCACTGAGAAGGCAACGACAAATCGTACATGGAGTTGGTCAAACATATCCAGTCCCATATTCAAATGCTCTGACAAGGTTAGATCTTTGCTGTCGTCTCTCCAGTGCAGTATACTGAAGATCTCAGTCAACGATGCTTGTGATGGTCCAACAAAAGGTGCTACTAAACCTTTCGAAGCTATATTTGTGTCATCTAAAACCAAGAACAAGGATGTAGTTGATCCATTAATTGTGATCCTTCATGGAGGGCCACAGGATGTCTCTTTGTCACACTTCTCAAAGTCTTGGGCTTTTCTATCTTCAGTTGGATACAGCTTACTGATTGTAAATTACAGAGGTTCATTAGGATTTGGTGAGGAAGCATTACAGTCTCTTCCAGGCAAAGTTGGGTCTCAGGATGTCAAGGATGTTCTCTCTGCCATAGATTACGTCGTCAACTTGGGTCTTGTCAGTCCATCCAAGATTACAGTGATGGGTATTTCACATGGTGGTTTTCTGACAACCCACTTGATTGGCCAGGCTCCGGAGAAGTTTGTAGCAGCAGCGGCAATCAATCCTGTTTGTAACTTCGCACTGATGGTTGGTACAACTGATATACCTGATTGGTGCTATGTAGAGGCCTGTGGAACCATTGCCAGAAATCGCTTTACTGAAGCACCTTCAGTGGAAGATTTGACTCTCTTTTATAGCAAATCTCCTATTTCACACGTTTCAAAGGTAAAAGCACCAACACTTTTCCTATTAGGTGCTCAAGATCACCGTGTTCCAATTTTTGATGGATTGCAATATGCCCGGGCATTAAAAGAGAAAGGAGTGGAAGTCAAAATCATTATGTTCCAAAATGATGTTCATGCACTCCCAAGGCCACAATCTGAATGGGAATGTTTCCTTAACATTGGGGTGTGGTTTAACAAGTACTGCAAATAA 2280 0.425 MSLEEDEKEDYASLSDLLQHFTTIPNIDKAWLFKSDNNSKLGMFSISQPNLLANKKRTFILSCDILKESDRCVKFVWDPFPIEMSGVSMIVPSPSGSKLLVIRNPENEEAPTRFEIWSSSHLEKEFHIPQSLHGSVYNDGWFEGVSWNLDETLIAYVAEEPSPAKPMFNNLGYKKDGGSADKDFGSWKGQGDWEEDWGETYAGKRTPTLFVININSGEVQAVKGIDKSLSVGQVVWAPFIEGSEQYLVFVGWSSETRKLGIKYCSNRPCALYAVRAPDHESKSEQPEHRLTDELHALKLTPTISSAFFPRFSPNGKFLVFLSARSAVDSGVHNATNSLHRIDWPTNEKLYQSAKVYDIIPVVMCAEDGCFPGLYCTTIHNNPWLSDNCTMIISSIWHSTEVLLSVNVLSGKILHISPADSIFSWNLLMLDGSNIVAISSGPVDVPQIKYGMVTEKATTNRTWSWSNISSPIFKCSDKVRSLLSSLQCSILKISVNDACDGPTKGATKPFEAIFVSSKTKNKDVVDPLIVILHGGPQDVSLSHFSKSWAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVKDVLSAIDYVVNLGLVSPSKITVMGISHGGFLTTHLIGQAPEKFVAAAAINPVCNFALMVGTTDIPDWCYVEACGTIARNRFTEAPSVEDLTLFYSKSPISHVSKVKAPTLFLLGAQDHRVPIFDGLQYARALKEKGVEVKIIMFQNDVHALPRPQSEWECFLNIGVWFNKYCK* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g00023 759 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 7 758 - -
Rops6g00023 759 Gene3D alpha/beta hydrolase 506 757 IPR029058 -
Rops6g00023 759 SUPERFAMILY DPP6 N-terminal domain-like 81 443 - -
Rops6g00023 759 SUPERFAMILY alpha/beta-Hydrolases 526 758 IPR029058 -
Rops6g00023 759 Pfam Prolyl oligopeptidase family 542 758 IPR001375 GO:0006508|GO:0008236
Rops6g00023 759 ProSitePatterns Prolyl endopeptidase family serine active site. 587 617 IPR002471 GO:0004252|GO:0006508
Rops6g00023 759 FunFam Acylamino-acid-releasing enzyme 499 758 - -
Rops6g00023 759 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 8 280 IPR045550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g00023 Rops-Chr6 717304 732575 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g00023 526 742 Carbohydrate Esterase AT5G36210 26.267 2.50e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g00023 K01303 - gmx:100812681 1288.48