Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02252 ATGCAGTCTATTCCTTTGGGTATCTCAGTATCCTCAACTCCAATAAAAACCACTAAAATCTCACCTTTCAATATTAGTTTCAGGAAACCAACCTTTTTACCATCCAAAGTTTCACCTTGCTCTAATGAATTGTCTCTCTCCATATCAGGATTTTGCAGGGCCAGCAAAGTTGTTGATTTGTTTCCAACCGTGTCTCCTGAAATTATTGTCCGTGAGGCAAGAATAGAGGACTACTGGGAAGTGGCAGAGACTCACTGCAGCACCTTCTTCTCTGAATATTCATTCCCACTAGACTTTGTGCTGAGGATAGACAGATTGGTGGTGGCTATGTTAGCATATATGTTAGCAGGATTGGCTAGGCCAAGAGGTTGCAGAAGAATCTGTTTGGTGGCTGTTATTGGCAGTTCACTTGATGAAACTTTTTTATCTGGAAATGGAGATCTCAAGATTGGTGGTTTTAATTGGATATTTAGCCCCTACAAGGGATATGTGGCTGGAATATTAACAGTAGACAATATTGCAGACTTTCTACCAAGGAAGGGGCCACGGCGACAGAGAAGGACTGGAATTGCTTACATATCAAATGTAGCAGTCAGGGAAAAATTTCGAAGGAAGGGAATTGCTAAAAAATTGATAGCAAATGCAGAATCCATGGCCAGAAGCTGGGGTTGTCGTGCTATTGCATTACACTGCGATTTGAACAATTCTATAGCCACAATGTTATATCAAGGCCAAGGTTTCAAACGTATCAAGGTGCCAGAAGGAGCAAAGTGGCCTCAGCCAAAGACCTCACCAGATATCAGGTTCAACTTCATGATGAAACTTCTCAAAAACTCAGCAGCTTCTAATTAA 852 0.4143 MQSIPLGISVSSTPIKTTKISPFNISFRKPTFLPSKVSPCSNELSLSISGFCRASKVVDLFPTVSPEIIVREARIEDYWEVAETHCSTFFSEYSFPLDFVLRIDRLVVAMLAYMLAGLARPRGCRRICLVAVIGSSLDETFLSGNGDLKIGGFNWIFSPYKGYVAGILTVDNIADFLPRKGPRRQRRTGIAYISNVAVREKFRRKGIAKKLIANAESMARSWGCRAIALHCDLNNSIATMLYQGQGFKRIKVPEGAKWPQPKTSPDIRFNFMMKLLKNSAASN* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02252 283 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 101 278 IPR000182 GO:0016747
Rops5g02252 283 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 280 - -
Rops5g02252 283 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 63 276 IPR016181 -
Rops5g02252 283 Gene3D - 66 251 - -
Rops5g02252 283 Pfam Acetyltransferase (GNAT) family 159 247 IPR000182 GO:0016747
Rops5g02252 283 CDD NAT_SF 183 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02252 Rops-Chr5 49126260 49130323 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops5g02252 Acetyltransf_1 4.2e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02252 - - gmx:100803930 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g02252 5 49126260 49130323 Rops6g02441 6 44577901 44580546 PCT