Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02233 ATGGAACATATTTTGGACAAAAGATTTCCTCTCAGTGCAAATGATTACAAGTTATATGAAGAAGTTGGTGAAGGCGTTAGTGCCTCGGTATACAGGGCGCTCTGCATTCCTCTCAATGAGATAGTTGCCATCAAGGTTCTTGATCTAGAGAAGTGCAATAATGATTTGGATGGCATTCGTAGAGAGGTACAGACCATGAACTTGATTGATCATCCAAATCTTTTACAGGCACATTGCTCTTTTACTACTGGACACAATCTTTGGGTTGTGATGCCATACATGGCCGGGGGCTCTTGCCTTCATATAATGAAATCTTCCTATCCTGAGGGTTTTGAAGAGCCTGTTATTGCAACTTTATTGCGTGAGGTTCTCAAAGCTCTTGTCTATCTTCATGACCATGGTCACATACATAGAGATGTTAAGGCTGGGAATATTTTGCTTGATTCTAATGGTGCAGTCAAACTAGCTGACTTTGGAGTTTCTGCATGCATGTTTGATGCTGGAGATAGGCAACGTTCAAGAAATACTTTTGTTGGAACACCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTACATGGATATGATTTTAAAGCAGATATATGGTCATTTGGTATAACAGCTCTAGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCACCGATGAAAGTTTTGCTCATGACTTTGCAAAATGCACCTCCAGGTCTTGATTATGAAAGAGACAAGAGATTTTCAAAGTCTTTCAAGGACTTGGTTGCCACCTGCTTAGTGAAAGACCCAAAGAAGCGTCCAAGTTCAGAAAAGCTTTTAAAGCACCATTTCTTTAAACATGCACGCGCCACCGAATATCTAGCTCGAACCATTCTAGATGGCCTTGATCCATTAGGAGATCGTTTTAGAACATTGAAGGCTAAAGAGGCAGATTTATTGATGCAGAACAAGGCTCTTTATGAGGATAAGGAGCAATTATCTCAGAAAGAATATATTCGAGGAATTAGTGCCTGGAATTTTAACCTGGAAGATTTAAAAAGTCAAGCTGCTCTTATTCAAGATGCCGACATGCCAAATGCGGAAGAGTCAGATATGGACAAGAAGCAAAAGGACGGATCTAATGACTTAAGGGTTCCAGCAGAGGGGCTATCTGCTGCTAATCATTCAGACGGTGCATCCACACTGGACAAGGAGGATGGATTCAACAATCTTCAGGATTTGGACAGTTCATTTGCTTCATTTCCTAGTAAACCTCTTCAAGCACTTAAAGGTTGTTTTGATATCTGCGAGGATGATGCCATCAATACTAGTCCAAGAGATTTGGATAATGATTATGGAAGAATTGATAATGAAAGTTCTGGGCCAAGTAGTTCATTGTCACAAAATGCTATAACTCCACCTAGAAAGTTCTCGAGTGGTCCTCTGCAACCTGATAATTTTCTTCTGCCCAAAAAGGTTACTGATTGGGACAGGGATTATCTGCAAACAAAATATCCTTCTGAGCGGAATCACAGTGGTCCATTGTTATATCGGCAGAAGAGAGATACCAACAACCTTCCATTAGTTGATGACACATCAGAAGGAGCAATTGTCCAGCGTAGGGGGCGGTTTAAGGTCACATCAGCAGATCCAAGTCCAATGGGTCCTTCAAACAGCACTTCTGGCCCAGTTAGTGGAAGTCCTACAAGTTCCCCAAATCAGAACTTCATGGCTGCCGCTATTCTTCCATCACTGCAGAGCATCTTGCAACAGAATGGGTTGCAGAGGGAAGAAATTATTAAATTAATAAAGTATGCAGAGCAATCTTGTGGCAAGAATACAGAATCTGTAGAGGCAGGGGCAGTTGATCTTTTGCAGGTACCACCTGCGACAACTAGAGAGAAAGAGCTGCATCTTCAGGTGATTCAACTCCATCAAAGCATTGGGAACCTTGTTGAGGAATTGCAAAGACAAAAGATGAAAAATGTTCAGTTAGAGAAACAGTTGAGCAGTATGGTTAACAAAGTTGAAAAATGA 2013 0.4138 MEHILDKRFPLSANDYKLYEEVGEGVSASVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMNLIDHPNLLQAHCSFTTGHNLWVVMPYMAGGSCLHIMKSSYPEGFEEPVIATLLREVLKALVYLHDHGHIHRDVKAGNILLDSNGAVKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKDLVATCLVKDPKKRPSSEKLLKHHFFKHARATEYLARTILDGLDPLGDRFRTLKAKEADLLMQNKALYEDKEQLSQKEYIRGISAWNFNLEDLKSQAALIQDADMPNAEESDMDKKQKDGSNDLRVPAEGLSAANHSDGASTLDKEDGFNNLQDLDSSFASFPSKPLQALKGCFDICEDDAINTSPRDLDNDYGRIDNESSGPSSSLSQNAITPPRKFSSGPLQPDNFLLPKKVTDWDRDYLQTKYPSERNHSGPLLYRQKRDTNNLPLVDDTSEGAIVQRRGRFKVTSADPSPMGPSNSTSGPVSGSPTSSPNQNFMAAAILPSLQSILQQNGLQREEIIKLIKYAEQSCGKNTESVEAGAVDLLQVPPATTREKELHLQVIQLHQSIGNLVEELQRQKMKNVQLEKQLSSMVNKVEK* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02233 670 MobiDBLite consensus disorder prediction 496 564 - -
Rops5g02233 670 MobiDBLite consensus disorder prediction 543 564 - -
Rops5g02233 670 SUPERFAMILY Protein kinase-like (PK-like) 13 278 IPR011009 -
Rops5g02233 670 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g02233 670 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 7 651 IPR047173 GO:0043539
Rops5g02233 670 MobiDBLite consensus disorder prediction 448 468 - -
Rops5g02233 670 MobiDBLite consensus disorder prediction 435 481 - -
Rops5g02233 670 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Rops5g02233 670 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g02233 670 MobiDBLite consensus disorder prediction 359 374 - -
Rops5g02233 670 MobiDBLite consensus disorder prediction 357 377 - -
Rops5g02233 670 Coils Coil 640 667 - -
Rops5g02233 670 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Rops5g02233 670 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Rops5g02233 670 Gene3D Transferase(Phosphotransferase) domain 1 97 325 - -
Rops5g02233 670 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g02233 670 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Rops5g02233 670 CDD STKc_OSR1_SPAK 14 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02233 Rops-Chr5 48642477 48654850 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02233 1 667 MAP Kinase Kinase Kinase Kinase AT5G14720 65.985 0.0 910
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Rops5g02233 Pkinase 1.2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02233 K08835 - gmx:100778837 1143.64