Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02216 ATGGCCATTCTTCTTGCCTCAGGGCTATTCTTTCTGCTGCTCAATCTAGTCCAGTGGTTGCTTCATAGGGATTTGCTCGATAGTGGAGCTCTTGTTTGTGCTTCCACTAGTAGATACGACTGTCCTGGGAGCACTCCCCTTCATCTAGCTGCTAGAGGGGGATCTCTGGATTGTATTCGTGAATTGTTGGCATGGGGTGCGGATCGTCTTCATCGTGATGCATTTGGGCTGATACCATATGTGGTTGCTCTGAAACACAGACATGGAGCATCTGCGTCACTACTAAATCCTACATCTGTAGAGCCTCTTGTCTGGCCATCTCTATGGAAGTTCATTAGTGAACTTATTCCAGAGGCCAAAGCTTTATTAGTACAGGCCTCGATGGATGCAAACAAAGAAAGGGAGAAAAACGTATTAAAGGGGAGTGCTTATTCTCTTCCATCTCCATCACACCCTTTGGCAAAGTTGTACATGCTCATTCACGTAAATACGGTGAAGGTTTGTGCTGATACATGA 516 0.4574 MAILLASGLFFLLLNLVQWLLHRDLLDSGALVCASTSRYDCPGSTPLHLAARGGSLDCIRELLAWGADRLHRDAFGLIPYVVALKHRHGASASLLNPTSVEPLVWPSLWKFISELIPEAKALLVQASMDANKEREKNVLKGSAYSLPSPSHPLAKLYMLIHVNTVKVCADT* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02216 171 ProSiteProfiles Ankyrin repeat profile. 42 74 IPR002110 GO:0005515
Rops5g02216 171 ProSiteProfiles Ankyrin repeat region circular profile. 42 68 - -
Rops5g02216 171 Pfam Ankyrin repeats (many copies) 43 80 IPR002110 GO:0005515
Rops5g02216 171 Gene3D - 13 155 IPR036770 -
Rops5g02216 171 SUPERFAMILY Ankyrin repeat 25 96 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02216 Rops-Chr5 48205766 48206370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02216 4 88 Ion Channels AT2G26650 38.043 6.81e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02216 - - gmx:100786708 220.705