Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02215 ATGTCTCTTTATTCTCTCTCTTCTTCTTTGGTCTGTGCAAACCCCAAAATGCAGAACCTTTCTGTGTCACGTTCTTCTTCAACGCCACATGTTCTAAACCACATAACCATTGCCAAGTTCCCTTCTTTTCTCTCTCATTCCCTCCTCTTTTCTGCTTCACCACTCAGTCTCACCATCATCAATGGACTTTCACCATGCCCATCATCTTCTTTGTTCCTCAGTGCTCCAAAGTCTTCTCCTTTTCATGTTTCTACTCCAAAAATTGCATCTTTCAGGGTCCTTGCTGCTTCTATGCCAGATGCTAAAAGTGATGAGCCAGTTAAACCTTCTGGTTTGGTTCAAACTCTGCAGCTTGGTGCCATGTTTGCAACTTGGTACCTCTTGAATATTTACTACAACATCTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTTACATCATTTCAATTTGGCTTCGCTACTTTGATGATTAACTTGATATGGACTTTGAATCTTCATCCCAGACCAAACATCAACCGTTCACAGTTTGCATCAATTCTTCCACTGGCTGTGGCTCATACAATGGGGAACTTGTTGACCAACATAAGTCTTGGCAGGGTTAATGTATCTTTCACTCACACAATCAAAGCTATGGAGCCTTTTTTCACTGTTGTTCTTTCTTCACTTTTTCTGGGTGAGAGGCCCACTTTCTGGGTGGTTTCTTCCCTTGTACCAATAGTAGGTGGAGTGGCATTGGCATCAATGACTGAAGTCTCTTTCAATTGGATTGGTTTCAGTACTGCTCTGGCATCTAATCTTACTAATCAATCACGGAATGTTTTGAGCAAAAAAATAATGGCCAATGATGAGGAAACTTTGGACAATATCAATCTCTACTCAGTAATAACCACGATTTCCTTCATCCTATTGCTCCCATGTGCTATATTTTTGGAGGGTGTCAAGTTTACTCCGTCATATCTGCAATCTGCTGCAAGCCAAGGATTGAATGTTAGAGCTCTATGTGTGAGATCAATTTTGGCTGCATTCTGTTTCCATGCATACCAACAGGTCTCTTATGGTATATTACAAATGGTGTCACCTGTGACCCACTCAGTTGGAAACTGTGTGAAGCGTGTGGTTGTCATAGTCTCTTCAGTTATCTTCTTCCAAAATCCTGTCTCACCCATTAATGCACTTGGAACTGCTATTGCACTTGTTGGAGTTTTCTTGTATTCAAGGACAAAGAGGAGTAAGCCAATGCCAAACACAAAAGCAGCATAA 1272 0.4112 MSLYSLSSSLVCANPKMQNLSVSRSSSTPHVLNHITIAKFPSFLSHSLLFSASPLSLTIINGLSPCPSSSLFLSAPKSSPFHVSTPKIASFRVLAASMPDAKSDEPVKPSGLVQTLQLGAMFATWYLLNIYYNIYNKQVLKVYPFPATVTSFQFGFATLMINLIWTLNLHPRPNINRSQFASILPLAVAHTMGNLLTNISLGRVNVSFTHTIKAMEPFFTVVLSSLFLGERPTFWVVSSLVPIVGGVALASMTEVSFNWIGFSTALASNLTNQSRNVLSKKIMANDEETLDNINLYSVITTISFILLLPCAIFLEGVKFTPSYLQSAASQGLNVRALCVRSILAAFCFHAYQQVSYGILQMVSPVTHSVGNCVKRVVVIVSSVIFFQNPVSPINALGTAIALVGVFLYSRTKRSKPMPNTKAA* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02215 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 333 413 - -
Rops5g02215 423 PANTHER SOLUTE CARRIER FAMILY 35 117 412 - -
Rops5g02215 423 Pfam Triose-phosphate Transporter family 116 409 IPR004853 -
Rops5g02215 423 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 116 417 IPR004696 GO:0016020|GO:0022857|GO:0055085
Rops5g02215 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 155 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02215 Rops-Chr5 48147031 48151798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02215 87 421 Antiporters AT3G01550 63.881 2.49e-145 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02215 K15283 - gmx:100819280 584.719