Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02197 ATGAATACGACGCCGTTTATGGACAAGCAGATAATGGATCTCACTTCTTCAACTCAGAACAAGGACTTCATCGATCTAATGAAGCACCAAAACGAAGAACAACAACAACAACAACATCATCATCATCAGCATCATCGAATTGATGATGATGAAGAAGAAGAATCACGTGGCAATGGGATCAACACCGACAACATCGTACCCAGTTACGATTTCCAACCGATTCGTCCACTCTCTGCTTCAAATTACGATTCTGCCCCCAATTTCGATGCTGCATCTTCTAGGCCTTGGAACTCTGATTCCAACTCCAACTCTTACCCTAACATCACCAAAAATTACAGTTCTCTGGATTCTATCGAACCTGCAAAGGTCAATGTAGAGAAGGACCGAAATACAATGTTGTCTGAGATTGATCAAACTGTGAAGAAACATATGGAAAATATGCTTAATGTTCTGGAAGGTGTTAGTGCACGTTTAACACAACTAGAAACCAGAACCCACCATCTTGAGAATTCTATGGATGATTTGAAGGTATCTGTTGGAAATAATCATGGTAGCACTGATGGAAAGTTGAGGCAGCTGGAGATTATTCTTCATGAGGTGCAATCAGGGGTGCAAACTATCAAGGACAAGCAAGATATAATGCAAGCTCAGCTGCAACTGGCAAAGCTACAAGTATCCAAGACGGATCAACAATCAGAAACGCAAACTAATGTAATTAAAGATCCTGTGCAGCAAGCTGCTTCTGCTCCCCTGCAATCTCAACCGCAGCTTCCTTCCTCGGTTAATCTTCCACAATCTATTCCGGTGGTTCCTCTCCCTAATGCACCTCCTCAACCACCCTCCCAACAACAGGGTTTGCCACCTCCTGTTCAAGCTCCTAATCAATTCTCTCAGATCCAAATCCCAGCTGTTCCTCAGAGAGATCCGTACTTCACACCACCCAATCAATCTCAGGAAACCCCGAATCAGCAATACCAATTGTCTTTACCTCAGCAGCCACATTCTCAACCTGGGGCACCTCCACATCAACAATATCAACAAACCCCTCATCCCTCATACCCTCAGCCAGCATCTCATCTACCTCAACAACAGCCACCACTGTCACCCGGAAATCCACCTCAACTACAATCTTCGCTAGGTCCCCATGTAGAGGAACAACCTCCTTATGTTCCTCCTCAGAATTATCCTCCCAATCTTCGCCAGCCACCTAGTGGACCTCCTCCTCCTCCCCAACAGTTCTATGGCACACCAACTCATGCATATGAACCACCATCTAGTAGACCTGGTGCTAGTTATTCTTCTGGATATGGTACATTGTCCGGGCCTGCTGAGCCGTATCGTTATGGTGGATCGCTGCAGTATGGTGGTAAACCTCAAGTACCTACTGCTTCAGTGGCTCCAAGTGGTGGAAGTGGTTATCCACAACTCCCAACTGCAAGGGTACTCCCACAAGCAATACCTACTGCATCTGCAGTAAGTGGTGGTTCAGGTTCTGCTGGAACTGGAAGCAGGGTTTCTATTGATGATGTAGTTGACAAAGTTTCTAGCATGGGATTCTCTAGAGACCATGTGAGGGCAACAGTTAGGAAGCTGACAGAGAATGGTCAATCAGTTGACCTGAATGCAGTGCTGGATAAGCTCATGAATGAAGGTGAGCCACCAAGAGGTTGGTTTGGACGGTAG 1683 0.4581 MNTTPFMDKQIMDLTSSTQNKDFIDLMKHQNEEQQQQQHHHHQHHRIDDDEEEESRGNGINTDNIVPSYDFQPIRPLSASNYDSAPNFDAASSRPWNSDSNSNSYPNITKNYSSLDSIEPAKVNVEKDRNTMLSEIDQTVKKHMENMLNVLEGVSARLTQLETRTHHLENSMDDLKVSVGNNHGSTDGKLRQLEIILHEVQSGVQTIKDKQDIMQAQLQLAKLQVSKTDQQSETQTNVIKDPVQQAASAPLQSQPQLPSSVNLPQSIPVVPLPNAPPQPPSQQQGLPPPVQAPNQFSQIQIPAVPQRDPYFTPPNQSQETPNQQYQLSLPQQPHSQPGAPPHQQYQQTPHPSYPQPASHLPQQQPPLSPGNPPQLQSSLGPHVEEQPPYVPPQNYPPNLRQPPSGPPPPPQQFYGTPTHAYEPPSSRPGASYSSGYGTLSGPAEPYRYGGSLQYGGKPQVPTASVAPSGGSGYPQLPTARVLPQAIPTASAVSGGSGSAGTGSRVSIDDVVDKVSSMGFSRDHVRATVRKLTENGQSVDLNAVLDKLMNEGEPPRGWFGR* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02197 560 MobiDBLite consensus disorder prediction 310 353 - -
Rops5g02197 560 MobiDBLite consensus disorder prediction 269 287 - -
Rops5g02197 560 MobiDBLite consensus disorder prediction 305 438 - -
Rops5g02197 560 MobiDBLite consensus disorder prediction 354 372 - -
Rops5g02197 560 MobiDBLite consensus disorder prediction 244 267 - -
Rops5g02197 560 Coils Coil 144 164 - -
Rops5g02197 560 MobiDBLite consensus disorder prediction 385 414 - -
Rops5g02197 560 MobiDBLite consensus disorder prediction 31 53 - -
Rops5g02197 560 PRINTS Proline rich extensin signature 268 284 - -
Rops5g02197 560 PRINTS Proline rich extensin signature 384 401 - -
Rops5g02197 560 PRINTS Proline rich extensin signature 403 428 - -
Rops5g02197 560 PRINTS Proline rich extensin signature 302 314 - -
Rops5g02197 560 PRINTS Proline rich extensin signature 333 354 - -
Rops5g02197 560 Pfam UBA-like domain (DUF1421) 507 550 IPR010820 -
Rops5g02197 560 MobiDBLite consensus disorder prediction 31 72 - -
Rops5g02197 560 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 559 - -
Rops5g02197 560 MobiDBLite consensus disorder prediction 244 293 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02197 132 550 Trihelix Transcription Factor Family AT3G01560 46.154 2.04e-68 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02197 - - gmx:100778494 694.501