Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02188 ATGGAGTCACCTATCAATGGAGTTGATTCCTTATCAGAGGTTCAGAATTCAGTTTCTGGGGTACATCACAATCCTCCTTCAACATCTGGGACTCCCCGTCCTTCGCGACCTCCGTTGAGAGCATCTAGAAATCATGGTGCCTCTTCCGCATCTTTTTTGGCTGGTCACCATAATTATGGAACAAAGGCCATCCACCATCATCAAAACAGCTGTGTAATTAATCAAAAGCATTCCTATCAGGAGGGAAACAATGTGGAGCATGAAGGATTGCCTACAAAGTTATGCTGCAAGCAACCATTTGATGATTCCAAGAATTGTGAGTTAAATGGTGTATTAGAATCTGACAATTGCATCTTAGTTCCATCGAAACGAGCTGTTGCTAATCATGCAAAGAGTTATTGTCAGTCAGATGTTACATTTTGTCCAAGTCCTCAGAATAGTTTCTATTCAGCCACTGTCTATTCAGAAGCCAAAGAAAGTTTCACCAATACTGAAGTCAGTGAGTGTGCCAGCATGGATAAGTCATGTGAAAGTGGAGAAGTAACAAATTCCTGTGATTTTAATGAGAGCAGGAAGACCAGCATCTGTAGAGCGAGTACGGGAAGTGATGTTAGTGATGAGAGCAGCACTAGTAGTTTGAGCAGTGCTTTGTATAAACCCCATAAGGCAAATGATATAAGATGGGAAGCAATTCAAGCCATCCGAGCTCGTGATGGGATGTTGGAAATGAGGCATTTCAGGTTGTTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTATATCTAGCTGAACTGAGTGGCACAAGGACCTCTTTCGCCATGAAAATCATGAATAAAACCGAGCTGGTGGGCCGCAAGAAGCTTCTGAGGGCTCAGACAGAGAGAGAGATATTGCAATCTTTGGATCATCCTTTTCTACCCACATTATATACTCACTTTGAGACAGAGACATTCTCCTGCTTGGTAATGGAGTTCTGCCCTGGTGGAGACCTGCATGCACTCAGGCAAAGACAACCTGGGAAGTATTTTTCAGAGCATGCTGTCAGGTTAGCTATTCCTTTTTCTGCTTGCCCCTTTCAATTATATCTATATATGACAAGCAGACACATATACAGCAAGCAAGGGTCAGTGAACTTGGATATTTATGAACTCAAGTATTCCATGGCACCAGGAGAGAAAATTCATGAAGGAAAACTCCATCCTTTCCGTGGGAATTAA 1218 0.4253 MESPINGVDSLSEVQNSVSGVHHNPPSTSGTPRPSRPPLRASRNHGASSASFLAGHHNYGTKAIHHHQNSCVINQKHSYQEGNNVEHEGLPTKLCCKQPFDDSKNCELNGVLESDNCILVPSKRAVANHAKSYCQSDVTFCPSPQNSFYSATVYSEAKESFTNTEVSECASMDKSCESGEVTNSCDFNESRKTSICRASTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAIRARDGMLEMRHFRLLKKLGCGDIGSVYLAELSGTRTSFAMKIMNKTELVGRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEHAVRLAIPFSACPFQLYLYMTSRHIYSKQGSVNLDIYELKYSMAPGEKIHEGKLHPFRGN* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02188 405 Pfam Protein kinase domain 247 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g02188 405 MobiDBLite consensus disorder prediction 1 29 - -
Rops5g02188 405 FunFam Serine/threonine-protein kinase D6PK-like 244 329 - -
Rops5g02188 405 SUPERFAMILY Protein kinase-like (PK-like) 223 349 IPR011009 -
Rops5g02188 405 PANTHER FLIPPASE KINASE 1-RELATED 105 349 - -
Rops5g02188 405 MobiDBLite consensus disorder prediction 1 53 - -
Rops5g02188 405 ProSiteProfiles Protein kinase domain profile. 246 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g02188 405 SMART serkin_6 246 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g02188 405 Gene3D Phosphorylase Kinase; domain 1 240 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02188 Rops-Chr5 47810068 47811285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02188 154 365 AGC Kinase Gene Family AT5G47750 67.136 9.17e-88 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops5g02188 Pkinase 1.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02188 K08286 - gmx:100810909 557.37