Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02186 ATGGAGAAAGAGGTTGTGGATAACCTTTGGAATGGTGATAGAGAAGCTCAAATTCTAGCAGCTATGGAACTTAGTAGATTATGCAGTAAACAGAGGCACAATTTGGCAGAAAGTGGAGTTCTGGTTCCTTTAGTTTCCATGCTTCATTCTGAAAGTTATGAAGCCATAGAAGCTGCTTTGTGTGCTCTGCTCAGCCTTTCCTTTGGTAGTGAAAGAAACAAGGTTCGGATCATCAAGTTTGGAGCTTTGCCAGTTTTGCTGAATCTCCTCCATTGTCAAAGCCAGACAGTGGTACAATTGACAGTAGCAGCCATGCTAACCCTCTCTTCTTGCAAGGCAAATAAGGTAGCAATTGCTTCATCTGGGGCTATCCAACTCTTGGCTGAATTTATCAATAGCAGTAGCACTCAGTCCCAGCTTGATGCTATATCAACTCTCCACAACCTGGCAACCTGCCAAGAGATTGTTCCATTGATTGTCTCTTCTGGTGTTACATTATCCTTGCTTGAACTGATCCACAGCTCAGTAAAATCATCTCCATTGGTTGAGAAAGCAATTGGGTTGCTAGAAAATATAGTCTCTTCATCAGAGAGTGCACTTTGTGAGGCTGGGGGAGCAATTCAGATACTGGTTGAGACTATTGAAGATGGATCTTTACTAGGCAAAGAGCATGCAGTGGGCATACTTCTCCTTATATGCCAGAGCTGCAGAGATAAATACAGAGGGTTGATTTTGACAGAGGGAGTGATGCCAGGATTGCTTCAGTTAAGTGTGGATGGAACGTGGAGAGCCAAATCCATGGCTCGAGAATTGTTGTTGCTTCTAAGGGACTGCTCCAATTATAGCTCAAGACATAAACAAATTAACCATGAGCTTATAGAAAGGATAATGGAAGAAATTGATGCAGGAGGAGAGAATTTGGCAGATACAACTTTGGGGTTGGTAGAGGAGATGATTGCAAAGCTCAATACATAA 975 0.4256 MEKEVVDNLWNGDREAQILAAMELSRLCSKQRHNLAESGVLVPLVSMLHSESYEAIEAALCALLSLSFGSERNKVRIIKFGALPVLLNLLHCQSQTVVQLTVAAMLTLSSCKANKVAIASSGAIQLLAEFINSSSTQSQLDAISTLHNLATCQEIVPLIVSSGVTLSLLELIHSSVKSSPLVEKAIGLLENIVSSSESALCEAGGAIQILVETIEDGSLLGKEHAVGILLLICQSCRDKYRGLILTEGVMPGLLQLSVDGTWRAKSMARELLLLLRDCSNYSSRHKQINHELIERIMEEIDAGGENLADTTLGLVEEMIAKLNT* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02186 324 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 163 198 IPR000225 GO:0005515
Rops5g02186 324 Gene3D - 201 308 IPR011989 -
Rops5g02186 324 SUPERFAMILY ARM repeat 4 307 IPR016024 -
Rops5g02186 324 Pfam Kinesin-associated protein (KAP) 29 169 - -
Rops5g02186 324 Gene3D - 3 200 IPR011989 -
Rops5g02186 324 SMART arm_5 28 68 IPR000225 GO:0005515
Rops5g02186 324 SMART arm_5 111 151 IPR000225 GO:0005515
Rops5g02186 324 SMART arm_5 152 194 IPR000225 GO:0005515
Rops5g02186 324 SMART arm_5 70 110 IPR000225 GO:0005515
Rops5g02186 324 FunFam U-box domain-containing protein 4 3 196 - -
Rops5g02186 324 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Rops5g02186 324 FunFam U-box domain-containing protein 4 197 313 - -
Rops5g02186 324 PANTHER U BOX DOMAIN-CONTAINING 5 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02186 Rops-Chr5 47800638 47802055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02186 4 277 U-box Gene Family AT3G54790 33.571 1.20e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02186 - - gmx:100778534 520.005