Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02185 ATGTTACCACCAGTTCTTTGGAACTTGTGGCGTATCCATGATTTCATGACAGAGGTGTTGAAACGACATGGGGGCACTGGTGAATTCATGGGACCTTGGTTCACCAAAATGAACTACATGGTTACTTGTGACCCCATCAACGTTCACCACATTATGAGCAAGAGGTTTGACAACTATGTCAAGGGTCCTGAGTTTCGTGAGATTTTTCAAGCTTTTGGAGATGGGATAGTCACTGCTGATTCAGACACATGGAAATACATAAGGTCTCTACTCCATTCTTTGATTAAACAAAAAAGCTTTGAGGTTTTCTTCGAGAAAACCATTCAGAAGAAGGTGAAAAATAGCTTACTTCCAATATTGGATCATGTTCAACAACAAGGGTCGGTGGTTGATCTACAAGATGTCTTCAATCGGTTCACATTCGATAACATATCCTCCATTGTTCTTGGATGTGATCCTCAATGCCTTTCCATTGATTTTCCAGAAGTTGCATGTGAGAAGGCTTTTAACGAAGCTGAAGAGTCCATATTCTACAGACACACGGTGCCAAAAAGTGTTTGGAAGTTTCAAAAATGGCTTCAAATTGGTCAAGAGAAGAAGATGACAGAAGCATGCAAAACATTTGATGAATTCCTCTATTCATGTATAGCTTCTAAGAGAAAAGAGTTAAGCAAGTACAACAAAAATGAAATGGTTGACATGCTAACTTCTTTGATGAGAGAAGAAAGAGGACGAGTACATGATGAGAAGTTTCTAAGGGATGCTTCATTTAACCTTTTTGTAGCAGGGAGAGAAACCATAACTTCAGCTCTTACTTGGTTCTTCTGGCTTGTTTCTACAAACCCAAAAGTGGAAGCAAAGATTCTTGAAGAGATCAAAGATAATTTTGGTGCCAAGCTTGGGATTTTAGGCATTGAGGATGTGAAAAAATTAGTTTATCTCCATGGTGCTTTATGTGAAGCTCTAAGACTTTTCCCTCCTATACCTGTTGAGCGCAAGCAAGCAATCAAAACCGATATACTTCCAAGTGGTCACCATATTGATCCCAATATGATGATATTATTTTCTCCTTATGCAATGGGAAGACTTGAAGATATATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGGTGGATCTCTGAGAGAGGATGCATTGTTTATGCACCATCTTACAAGTTCATTAGTTTTAACGCAGGACCAAGGACTTGTTTGGGAAAAGACTTGTCCTTCATTGAAATGAAGATAGCGGCAGCAGCTATTTTACATGAGTATCGTGTACAATTGGTGGAAGATCATTCTTCTACCCCAAGCCATTCAATTGTTCTTCTTATGAAGAATGGTTTGAAGGCTAGGATAACTAAAAGACAAGTTTGA 1377 0.3907 MLPPVLWNLWRIHDFMTEVLKRHGGTGEFMGPWFTKMNYMVTCDPINVHHIMSKRFDNYVKGPEFREIFQAFGDGIVTADSDTWKYIRSLLHSLIKQKSFEVFFEKTIQKKVKNSLLPILDHVQQQGSVVDLQDVFNRFTFDNISSIVLGCDPQCLSIDFPEVACEKAFNEAEESIFYRHTVPKSVWKFQKWLQIGQEKKMTEACKTFDEFLYSCIASKRKELSKYNKNEMVDMLTSLMREERGRVHDEKFLRDASFNLFVAGRETITSALTWFFWLVSTNPKVEAKILEEIKDNFGAKLGILGIEDVKKLVYLHGALCEALRLFPPIPVERKQAIKTDILPSGHHIDPNMMILFSPYAMGRLEDIWGKDCLEFKPERWISERGCIVYAPSYKFISFNAGPRTCLGKDLSFIEMKIAAAAILHEYRVQLVEDHSSTPSHSIVLLMKNGLKARITKRQV* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02185 458 Gene3D Cytochrome P450 2 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02185 458 PRINTS P450 superfamily signature 395 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02185 458 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02185 458 PRINTS P450 superfamily signature 262 279 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02185 458 PRINTS P450 superfamily signature 316 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02185 458 CDD CYP86A 28 449 - -
Rops5g02185 458 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 397 406 IPR017972 GO:0005506|GO:0016705
Rops5g02185 458 PRINTS E-class P450 group I signature 394 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02185 458 PRINTS E-class P450 group I signature 251 268 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02185 458 PRINTS E-class P450 group I signature 271 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02185 458 PRINTS E-class P450 group I signature 404 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02185 458 Pfam Cytochrome P450 6 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02185 458 PANTHER CYTOCHROME P450 2 449 - -
Rops5g02185 458 SUPERFAMILY Cytochrome P450 5 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02185 Rops-Chr5 47742736 47744112 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02185 1 457 Cytochrome P450 AT2G23180 45.339 1.42e-154 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02185 - - gmx:100780625 754.977