Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02183 ATGACCATGCCCGGCTATGCAGCAATAATTGCAGCACTCCTCTGCTTCCTATACATCTTCCATAGGAGAAGATGTTGCAAATACCCCCTCTTGATAGACTATCCTATCCTTGGCATGTTACCACCAGTTCTTTGGAACTTGTGGCGGATTCATGATTTCATAACTGACGTGCTCAAACGACATGGAGGCACTGGAGAGTTCATGGGACCTTGGTTCACCAATATGAACTATATGGTCACCATTGACCCCATCAACGTGCATCACATCATGAGCAAGAGTTTTGACAACTACATCAAAGGCCCCGAGTTTCATGAGATATTTCAAGCTTTCGGGGATGGGATATTCACATCTGATTCAGAAGCATGGAAATACAACAGGTCTCTATTCCATTCTTTGTTTAAACAAAGAAGCTTTGAGGAACTTCAAGAGAAAATTGTTTACAAGAAGGTGGAGAGTAGCCTACTTCCTATATTGGATCATGTGCAACAACAAGGGACGGTGGTGGATCTACAAGATGTCTTCAATCGGTTCACATTTGATAACATATGCTCCATAATTTTGGGACATGATCCTAATTGTCTCTCACTTGACTTACCAGAAGTTGCATGTGAGAGGGCTTTTACCGAAGCAATGGAGTGCATATTCTACAGACACACAGTGCCAAAATGTGTTTGGAAGTTGCAAAAATGGCTTCAAATTGGTCAAGAGAAGAAGATGACCGAAGCATGCAAAACATTTGACCAATTCCTCTATTCATGTATAGCGTCTAAGCGAAAGGAGCTAAGCAAGTACAACAAAAATGGAATGGCTGATGACTTGCTAAGAACTTTGATGAGAGAAGAAAAGGGACAAGTGCATGATGACAAGTTTTTGAGAGATGCAGCATTCAATCTTTTTGTAGCAGGGAGAGATACCATAACTTCAGCACTCACGTGGTTCTTTTGGCTTGTTGCTACAAACCCTTCAGTGGAGGCCAAGATTCTTGAAGAGATCAAAGACAATTTTGACATGGAACTTGGGCTTTTAGGCATGGAAGAGGTGAAGAAGCTAGTTTATCTGCATGGTGCTATATGTGAAGCTCTGAGGCTTTTTCCTCCTATACCTTTTGAGCGCAAGCAAGCAATCAGAGCTGACATACTTCCCAGTGGTCACCATATTAATCCTAATACAATGATATTATTTTCTTTGTATGCTATAGGGAGATATGAAGATATATGGGGGAAAGATTGTTTAGAGTTCAAACCAGAGAGATGGATCTCTGAGAGGGGAGGTATTGTTTATGCTCCATCTTACAAGTTTGTTAGTTTTAATGCAGGGCCAAGGACTTGTTTGGGAAAGGACTTGTCCTTCATTCAAATGAAGATGGTGGCAACTGCTATTTTGTGCAACTATCATATCAGAGTGGTGGAAGATCATCTTGCTACCCCGAGCCATTCAATTGTACTTCTTATGAAGCATGGTTTGAAGGAGACATTTCTCTTTTGTTGCAACTCTGATATTCATCTTTTTTTTCTTTCTGGTTCAACCACCATGGCCAATTCTTCAATGTTTGATGATTCCAATCCCTTTTATCTTCATCCTTCAAACAATCCAGGTCTGATACTTGTTTCTCAACAATTCAATGGAGATAACTACTGTTCTTGGAGTCGTGCCATGAAAATGGCTCTTCTTGCCAAGAACAAATATGGTTTTGTGGATGGTTCTCTCCCTCAACCTGATGTTGCTGATGAACAAAGGTTCTTGGCATGGCAGCGCAACAACAACATTGTAAGTTCTTGGCTCCTTAATTCAGTCTCCAAAGACATCTCTACAAGTGTCTTGTATTCCAACACAGCAGCTGATATCTGGAATGACCTTAAAGAAAGGTTTCAGCAACAAAATGGACCACAAATTTTCTAA 1899 0.4076 MTMPGYAAIIAALLCFLYIFHRRRCCKYPLLIDYPILGMLPPVLWNLWRIHDFITDVLKRHGGTGEFMGPWFTNMNYMVTIDPINVHHIMSKSFDNYIKGPEFHEIFQAFGDGIFTSDSEAWKYNRSLFHSLFKQRSFEELQEKIVYKKVESSLLPILDHVQQQGTVVDLQDVFNRFTFDNICSIILGHDPNCLSLDLPEVACERAFTEAMECIFYRHTVPKCVWKLQKWLQIGQEKKMTEACKTFDQFLYSCIASKRKELSKYNKNGMADDLLRTLMREEKGQVHDDKFLRDAAFNLFVAGRDTITSALTWFFWLVATNPSVEAKILEEIKDNFDMELGLLGMEEVKKLVYLHGAICEALRLFPPIPFERKQAIRADILPSGHHINPNTMILFSLYAIGRYEDIWGKDCLEFKPERWISERGGIVYAPSYKFVSFNAGPRTCLGKDLSFIQMKMVATAILCNYHIRVVEDHLATPSHSIVLLMKHGLKETFLFCCNSDIHLFFLSGSTTMANSSMFDDSNPFYLHPSNNPGLILVSQQFNGDNYCSWSRAMKMALLAKNKYGFVDGSLPQPDVADEQRFLAWQRNNNIVSSWLLNSVSKDISTSVLYSNTAADIWNDLKERFQQQNGPQIF* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02183 632 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Rops5g02183 632 Gene3D Cytochrome P450 21 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02183 632 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02183 632 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02183 632 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02183 632 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02183 632 CDD CYP86A 66 488 - -
Rops5g02183 632 Pfam Cytochrome P450 42 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02183 632 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02183 632 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02183 632 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02183 632 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02183 632 PANTHER CYTOCHROME P450 23 488 - -
Rops5g02183 632 Pfam gag-polypeptide of LTR copia-type 526 573 IPR029472 -
Rops5g02183 632 SUPERFAMILY Cytochrome P450 18 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02183 Rops-Chr5 47571581 47576034 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02183 9 498 Cytochrome P450 AT4G32170 45.600 4.30e-162 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02183 - - aprc:113867564 781.941