Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02175 ATGGCTATGCTAGGCTATGCAGCAATGATTGCAACACTCCTGTGCTTCGTATACATGTTGCATCGGAGAAGATGTTGTAAATACCCTCTTTTGATAGACTATCCTATCCTTGGCATGTTACCACCACTCCTTTGGAACTTGTGGCGGATCCATGATTACATGACCGAGGTGCTAAAACAACATGGAGGCACTGGGGAGTTCATAGGACCTTGGTTCACCAATATGAGTTATACGGTCATCGCTGACCCCATCAACGTGCATCACATCATGAGTAAGTACTTTGACAATTACATCAAGGGGCCCCAGTTTCGTGAGATTTTTCAAGCTTTCGGAGATGGGATATTCACTGCTGATTCAGAGACATGGAAGTACAACAGGTCTTTGTTTCATTCTTTGTTTAAACAAAGAAGCTTTGAGGAACTTCAAGAGAAAATTGTTTACAAGAAGGTGGAGAGAAGCCTACTTCCGATATTGGATCATGTTCAACAGCAAGGGACAGTGTTTGATCTACAAGATGTCTTTAATCGGTTCACATTTGATAACATATGCTCCATTGTTCTGGGACATGATCCTAATTGCCTTTCACTTGATTTCCCAGAAGTGGCATGTGAGAAGGCTTTTAACCAAGTAGAAGAGTGCATATTCTATAGACACATAGTGCCAAAAAGTGTTTGGAAGTTGCAAAAATGGTTTAATATTGGTGAAGAGAAGAAGATGACCGAAGCATGCAAGGCATTTGACCAATACCTCCAGTGTTTCAAATTGCGGTTGCGATCGCGATTGCGATTGTGGTTGCGGCTACTGCGATTGCGGATCTGGAAAGATCTACGGGGGAGCAACAAGAACGAAGAGAGAGGCAGAAGCAGGTACAACAAAAATGAAATGGCTGATGACTTGCTAACAACTTTGATGAGAGAAGAAAAGGGACAAGTGCATGATGACAAGTTTTTGAGAGATGCAGCATTCAATCTTTTGGTAGCAGGGAGAGATACCATAACTTCAGCACTCACGTGGTTCTTTTGGCTTGTTGCTACAAACCCTTCAGTGGAAGTCAAGATTCTTGAAGAGATCAAAGACAATTTTGGGGCCAATGACATGGAACTTGGGCTTTTAGGCATGGAAGAGGTGAAGAAGCTAGTTTATCTGCATGGTGCTATATGTGAAGCTCTGAGGCTTTTTCCTCCTTTACCTTTTGAGCGCAAGCAAGCAATCAAAGCTGACATACTTCCCAGTGGTCACCATATTAATCCTAATACAATGATATTATTTTCTTTGTATGCTATAGGGAGAAATGAAGATATATGGGGAAAAGATTGTTTAGAGTTCAAACCAGAGAGATGGATCTCTGAGAGGGGAGGTATTGTTTATGCTCCATCTTACAAGTTTGTTAGTTTTAATGCAGGGCCAAGGACTTGTTTGGGAAAGGACTTGTCCTTCATTCAAATGAAGATGGTGGCAACTGCTATTTTGTGCAACTATCATATCAGAGTGGTGGAAGATCATCTTGCTACCCCGAGCCATTCAATTATACTTCTTATGAAGCATGGCTTGAAGGTTAGGATAATAAAAAGAGAAATTTAA 1581 0.4137 MAMLGYAAMIATLLCFVYMLHRRRCCKYPLLIDYPILGMLPPLLWNLWRIHDYMTEVLKQHGGTGEFIGPWFTNMSYTVIADPINVHHIMSKYFDNYIKGPQFREIFQAFGDGIFTADSETWKYNRSLFHSLFKQRSFEELQEKIVYKKVERSLLPILDHVQQQGTVFDLQDVFNRFTFDNICSIVLGHDPNCLSLDFPEVACEKAFNQVEECIFYRHIVPKSVWKLQKWFNIGEEKKMTEACKAFDQYLQCFKLRLRSRLRLWLRLLRLRIWKDLRGSNKNEERGRSRYNKNEMADDLLTTLMREEKGQVHDDKFLRDAAFNLLVAGRDTITSALTWFFWLVATNPSVEVKILEEIKDNFGANDMELGLLGMEEVKKLVYLHGAICEALRLFPPLPFERKQAIKADILPSGHHINPNTMILFSLYAIGRNEDIWGKDCLEFKPERWISERGGIVYAPSYKFVSFNAGPRTCLGKDLSFIQMKMVATAILCNYHIRVVEDHLATPSHSIILLMKHGLKVRIIKREI* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02175 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Rops5g02175 526 Gene3D Cytochrome P450 19 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02175 526 PANTHER CYTOCHROME P450 23 519 - -
Rops5g02175 526 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02175 526 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02175 526 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02175 526 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02175 526 Pfam Cytochrome P450 43 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02175 526 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02175 526 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02175 526 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02175 526 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02175 526 CDD CYP86A 66 517 - -
Rops5g02175 526 SUPERFAMILY Cytochrome P450 28 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02175 Rops-Chr5 47094184 47097069 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02175 1 524 Cytochrome P450 AT4G32170 43.797 1.06e-156 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02175 - - aprc:113867564 762.681