Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02172 ATGAGAGAAGAAGAAGGACAAGTACGTGATGACAAGTTTCTAAGAGATGCAATATTCAATCTTTTCATAGCAGGGAGAGATACCATCACTTCAACACTTACGTGGTTCTTCAGGCTTGTTGCTACTTCGGTGGAAGCCAAGATTCTTGAAAAGATCAAAGATAATTTTGGGGCCAATGGAAAGAAGCTTGGGCTTCTAGGCATGGAGGATGTTAAAAAGCTAGTTTATCTCCATGGTGCTATTTGCGAAACTCTAAGGCCTTTTCCTCCTATACATTTTGAGCACAAACGAGTAATTAAAGTTGACATACTCCCTAGTGTCCATCTTATTAATCCCAACACAATAATATTATTTTCTTTGTATGCAATGGGAATATTTGAAGATATATGGGGAAAAGATTGCTTGGAGTTTAAGCCAGAGAGATGGATTACTGAGAGAGGAGGCATTGCTTATTCACCATCTTACAAGTTTATTAGTTTTAATGCAGGACCTAGAACTTGCTTGGGCAAAGACTTATCCTTTATTCAAATGAAGATGGTGGCACCTAACCCATTTTACAAATAA 564 0.3777 MREEEGQVRDDKFLRDAIFNLFIAGRDTITSTLTWFFRLVATSVEAKILEKIKDNFGANGKKLGLLGMEDVKKLVYLHGAICETLRPFPPIHFEHKRVIKVDILPSVHLINPNTIILFSLYAMGIFEDIWGKDCLEFKPERWITERGGIAYSPSYKFISFNAGPRTCLGKDLSFIQMKMVAPNPFYK* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02172 187 Pfam Cytochrome P450 8 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02172 187 Gene3D Cytochrome P450 1 184 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02172 187 PANTHER CYTOCHROME P450 11 181 - -
Rops5g02172 187 SUPERFAMILY Cytochrome P450 3 181 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02172 187 PRINTS P450 superfamily signature 24 41 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02172 187 PRINTS P450 superfamily signature 79 90 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02172 187 PRINTS P450 superfamily signature 158 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02172 187 PRINTS P450 superfamily signature 167 178 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g02172 187 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 160 169 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02172 Rops-Chr5 47051893 47052456 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02172 10 181 Cytochrome P450 AT4G39490 50.820 9.35e-60 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02172 - - aprc:113867564 280.026