Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02136 ATGGCCTTGCAGAACATTGGTGCTGCAAATAGTGATGATGCCTTCTATAGGTATAAGATGCCTAAAATGATCACCAAAATTGAGGGCAGAGGGAATGGCATAAAAACAAATATTGTCAATATGGTTGATATTGCCAAGGCATTGGCAAGGCCAGCCTCTTACACAACCAAGTACTTCGGTTATGAACTTGGAGCCCAATCTAAATTTGATGAGAGAGCTGGGACTTCTCATGTTAATGGGGCACATGACACTGCAAAACTTGCTGCTCTTCTTGAGAACTTCATCAAGAAATATGTCCAATGTTATGGTTGTGGAAACCCTGAAACCGAGATACTGATTACTAAGAACCAAATGATCCAGCTGAAATGTGCTGCTTGTGGTTTCATGTCAGATGTGGATATGAGAGACAAGCTGACTGCCTTTATTATAAAAAACCCTCCTGAAACAAAGAAAGGGTCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAGAGACTGAAGGAAGGTGAAGTAGCTGATGAGGAACAAAAGAAAGTGAAGAAAGAGGTCAAGAAGAAAGGCTCTTCCACTTCCAAGGATGAGACGAAAAAATCGAGCTCTACAAAGAAGAAAGCAAGTGGCTCTGATGAAGACCGTGCATCACCGACTCACAGTCAGGTTGATGAGAAAGAAGAGGCTCCTGATGAAGATGATGATGGTGAAGTACAATGGCAAACAGATACGTCACTAGATGCTGCTCGCCAACGTATCCAAGAACAGTTAAGTGCTGTAACAGCTGATATGGTCATGCTCTCCACAAATGAGCCTGAGAAGAAGGAAAAAGTGGCAAGTAAGGTAAGTAATGGTTCTGAAAATGGTAACTCAATGCACTACAGGAAACTGGTCGGAGAAGTGAAAGCAAATTTGAAAAAAGGTATCAAGGCAAATGAATTGCAGTCCCATATGGCAGCACTTCCTGCATCTGCTCAAGAAAAGATCACTGCTCTGTTTGAGGCCTTGTTTGAGGGTATTGAGAAAGGGTTTGCAAAAGAAGTGATCAAGAAGAAGAGCTACGTTGCTGCTGCAGTTTCCATGGAGGAGGGTTCACAATTGCTATTGCTTCGTGCAATTGAGTTTTTTTGTCTTATGTCAACTTCCAATGCTTTGAAGGAAATTGCCATTATTTTGAAGGCACTCTATGATGCTGATGTGTTGGAGGAAGAGCACATAGTGCAGTGGTATCAAGAAGGGCTGAAGGGCGATAATAGGAACTCTCAGATATGGAAGAATGCCAAACCTTTGATTGATTGGCTTCAGAATGCAGAATCAGAATCAGAGGAAGAGTAA 1329 0.4236 MALQNIGAANSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGYELGAQSKFDERAGTSHVNGAHDTAKLAALLENFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFMSDVDMRDKLTAFIIKNPPETKKGSKDKKAMRRAEKERLKEGEVADEEQKKVKKEVKKKGSSTSKDETKKSSSTKKKASGSDEDRASPTHSQVDEKEEAPDEDDDGEVQWQTDTSLDAARQRIQEQLSAVTADMVMLSTNEPEKKEKVASKVSNGSENGNSMHYRKLVGEVKANLKKGIKANELQSHMAALPASAQEKITALFEALFEGIEKGFAKEVIKKKSYVAAAVSMEEGSQLLLLRAIEFFCLMSTSNALKEIAIILKALYDADVLEEEHIVQWYQEGLKGDNRNSQIWKNAKPLIDWLQNAESESEEE* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02136 442 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 441 IPR045196 GO:0003743|GO:0006413
Rops5g02136 442 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Rops5g02136 442 Pfam eIF4-gamma/eIF5/eIF2-epsilon 364 442 IPR003307 GO:0005515
Rops5g02136 442 Gene3D - 105 145 - -
Rops5g02136 442 MobiDBLite consensus disorder prediction 270 289 - -
Rops5g02136 442 CDD W2_eIF5 294 440 - -
Rops5g02136 442 Gene3D - 2 104 - -
Rops5g02136 442 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Rops5g02136 442 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Rops5g02136 442 MobiDBLite consensus disorder prediction 145 236 - -
Rops5g02136 442 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Rops5g02136 442 SUPERFAMILY ARM repeat 293 436 IPR016024 -
Rops5g02136 442 Gene3D - 285 442 - -
Rops5g02136 442 SMART 542_3 350 438 IPR003307 GO:0005515
Rops5g02136 442 FunFam Eukaryotic translation initiation factor 5 288 433 - -
Rops5g02136 442 MobiDBLite consensus disorder prediction 148 224 - -
Rops5g02136 442 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Rops5g02136 442 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 11 101 IPR016189 GO:0003743|GO:0006413
Rops5g02136 442 ProSiteProfiles W2 domain profile. 285 442 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02136 Rops-Chr5 46317882 46320257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02136 1 435 Eukaryotic Initiation Factors Gene Family AT1G36730 60.135 6.57e-177 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02136 K03262 - gmx:100796565 722.235