Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02101 ATGATACCGTGGGATCGAAAGGACTTGCTCAAGGAGAGGAAGCATGAAAGGTCTGAGTCTTTAGGGTCTGTGCCCAGATGGAGAGACTCTTCCGCTCATCACGGCTCCAGCGATTTTCGGCCGGTGGCAGGTCATGGCAAGCAGGGTGGTTGGCACCTGTTTCCAGAAGAATCTGGTAATGGGCATGCGCTTTCTCGGTCCGGTGACAAGATGCTGGAGGAAGATAACGGTCGGCCATCAGTTTCTCAAGGGGATGGAAAGTATGGCAGGAGCAATAGGGAAAGTAGAGGATCCTTTAGCCTGAGAGATTGGAGAGGACGTTCATTGGAAACTGCTAATGGCTCTGTGAATTTGTCCTGGAGGCAACCGGATGCGAATAATGACCAGAGGTCAGTTGATGATATGCTAACATATTCCTCTCATCCACATTCTGATTCTGTAAACACTCGGGAGCAGCCTCTCTGTAAAGAGCAGCATGATAAGATGGGTGGTGTCAATGGGTATAGGGAGAGTTCTCTGAGTTCGACTGAATGGAAGCCACTTAAATGGACCCGTTCTGGAAGCTTGTCTTTGCGAGGCTCAGGCTTTGGCCACTCAAGTAGCCCAAGAAGCATAGGAGGGCCAGATTCCTGTGAAGGGAAGGCTGGGTTGCGACACAAAATTGCAGCTGCTGTTGAGTCAAATTCAGGGGAAGCTGCTGCATGTGGGACATCTGCTTCATCTGAAGAGACAAATTCAAGGAAGAAGGCTAGGCTAAATTGGGGTGAGGGACTTGCAAAATTCGAGAAAAAGAAAGTTGAGGGGCCTGATGTAAGTGCAAACAAAGATGGCCGGGTCTCATCTCCTATTCATATGGAACCTGGTAATTTCCTCAGTACCAGCTTAGTAGAGAAAAGCCCGAAAGTTTCAGGATTTTCAGATTGTGCATCTCCTTCAACTCCATCTTCTGTTGCCTACAACTCCTCGCCAGCAGGTGTGGATGATAAATTATTTGGAAAAGCTGCAAATGTGGACAATGGTGTTAGTAATTTGAGTGGTTCACCTGGTCCTGGGTCTCAAAATCATCTGCAGATGCTTTCTTTCAATTTAGAGAAGGTGGATATTGGCTCATTGAGTAGTTTGGGCTCTTCACTTGTTGAGTTGCTACAGTCTAATGATCTGAACTCTTTGGATTCTAGTCCGTTGAGATCCACCACAATGAATAAGTTGCTGATATTGAAGGCTGACATTTCAAAGGTATTGGAGGTGACTGAAACTGAAATTGATTTACTTGAAAATGAACTGAAGTCTCTAAAATCTGAATCTGCGGATAGGTTTCCATGTTCAGCAGCAGCTGGCTCCCTGCTGGTGTGTTACAATGCAAAATCTTGTGCTGGACATGTTGGAGACTCTGACAAGGTTGCTCGTCCAGAACCATTGCAAATTGTTTCTTCTGATGACCCTAATGTGGAGAAGATGCCTCTTTCTCCCAACTTGCATGGCATACATGATAATGGCAAGGAAGATGATATTGACAGTCCTGGTACTGCAATTTCTAAATTTGTGGAGCCCCCGCCCTTGATTAATATAGCTTCTTCATGTGATATGAGGAGACATGATACTTGCTCTGAATATTTGGATGGAATTCAGTCTACATCGGTAAAATGCTTAATTCCCTGTACTTATAGGCAAGTTGCCAGTGTATCTGCTTGTGATGATGGTAATTCATCAATGGAGGTTAAAGATGGCATAGATGCTAAATCTGGTGTAAAATTTTATTCCAGTACCAAGGATAAATTATATAATACAATTATTTCTTGCAATAAAGAATCTGCAAAAAAAGCATGTGAAGTATTTGCTAAGTTATTGCCAGAAGGATGTGGTAAGATCGGTAATATTGGAGCTAGCAGTGGCTCATGCTCTCGTGATGGTGCATTCATTATGGAAAAATTTGCAGAGAAAAAGCGGTTTGCAAGATTTAAGGAGAGAGTTATAACACTAAAGTTTAAAGCCCTGCATCACAAGTGGAAAGAAGATATGCGCTTACTATCGATTAGGAAATGCCGCCTGAAATCCCCACTGGAATTAGGTCTACGAACTATCAGTAATGGTCATCAGAAGAACCGTTCTTCTATTCGTTTCCGTTTTCCCTTCCCTGCAGGAAAACAACATAGCTTGATTCCAACATCTGAGATGATTAATTATACAAGCCAGCTGCTTTCAGAATCCTCGAATAAAATTCACAGGAGCACCTTGAAGATGCCAGCATTAATTTTGGATCAGAAGGAGAAAATGATTTCAAAGTTTTTATCGAGAAATGGGCTGGTCGAAGATCCATTGGCTATTGAGAAAGAAAGGGCTATGATCAACCTCTGGACTTCAAAAGAGAGAGAGATTTTCTTGGAGAAATTTGCAGCCTTTGGAAAAGATTTTCGGAAAATTGCGTCTTTCCTTGACCACAAGACAACGGCTGACTGTGTTGAATTCTACTACAAAAATCATAAGTCCGACTGTTTTGAGAAAATTAAGAAAAAAGATGGTGGTAAGCTAGGGAAGTTTTTTACAGTCAAAACTGGCTTGATGGCATCAGATAAAAAATGGAATAGTAAAGTGAATGCTGCTTCACTTGAGATTTTGAGTGCAGCTTCAGTGATGGCCGATGGCATTGCAGGTAATCGAAAAATGCGTCCAGGATGTTCCATTTGGAGGGGATATGCTGATATGGAAACATCAAGGGGTGAGGATTGCATCACAGAGAGATCAAGCAGTTTGGACATTCTTCAAGATGAAAGAGAGACTGTTGCAGCTGATGTATTGGCTGGTATATGTGGTTCTCTTTCATCTGAGGCTATGAGTTCCCGCATAACAAGTTCAGTTGATCCTGTGGAAGGTAACAGGGACAGGAAGCGCATGAAAGTGAGGTCTCTATGCAAACAACCTATGGTGCCTGATGTTGCCCAGTGTATTGATGATGAAACTTGTTCTGATGAGAGCTGTGGTGAAATGGATTCTACTGAGTGGACAGATGGGGAGAAGGCAGCCTTTCTTCGGGCTGTATCATCTTTTGGAAACAATTTTGCAATGATTGCAGAGTGTATTGGAACAAGGTCCCAAAATCAGTGCAAAGTTTTTTTCAGCAAGGCTCGGAAATGCCTTAGGCTGGATCTCATGCACCCTAGACCTGAAAATATTGGATCCCTAATGAATGATGATGGAAACGGTGGCAGGAGTGATACAGATGACACATGTGTTGTGGAGACAAGTTCAGTCATTGGCACTGATACGTCAGGCACTAAAACAGATGAGGACCTGCCTTCATCTGTCATGAACACATACCATGAATCCAATCCCATGGAAGCCAGGGACCTGTCGGCTGTCTTAAATGAATCAAAGGATATTAATGGGGAAGAAGTAGATCATGAAGATGTAAATATGGTTTCTAATGCATGTGTAAATAAGGGCGAGTCTAAACTGGGCACTGATGGTAATCGGGTTGTCTTGTGCAGTTCTGATAAGTGTGGATCAATTGGGGACCAGAGAACTATAATTTTGTCAGATAGCATAGAAATTGGAAAAGATAAACCAAATGTAGTGGGAGGTGCAGTTACAGAATTGGTGTCTGCTTTGGAGATCGTTGAACCATGCCACTCTAATTCTGTTGCTGAGGATAGACTGGTTTCTGAGGTTTCTTCTGGGTGTCGTGGAAATGAATTGGAGGGGTCACCTACATGTCTCGTTGATAGTGATGATGTACATGAAGCTGATAAAGATGTTGTAGTTGAAATGAAAAACAAAGTCTATGATTCAAGTTCTACAGTAAATACTTCACTATCATCTGTAGGAATTTCTTGTTCAATATTGAGTTTTGATGCTGAAAATCATCCCCAACTGTGCCTTGATGAAAAATCTCATTTCTCAGGATCATTGGAGGATGCTCCTACAACTGCAAATTCAATATTGAAAAATATGGCTGGTACTGCTTTGCAATGTGAGAAAACAGTTAGCCAAGATCTACTGTCTTCTAATTGTGATTTTCAGGGAAGTAGAGATATCAGTGGTCATAATTCCAGTAGCAATGGTGGCTGTCAGCTTCATAATCCTGGGAATCAATTAGATGAGGCTTCTAGAACCCTTCAGTGCTATCCTTTGCAAGCGCCTGTCAAGGAAGTTAATGCGGATATGAGTTGCAGCAGTTCAGCAACTGAGTTGCCTCTTTTGTCCCAGAAGTTTGAACAAGCTGATGATCATTACAAAACACAGTTGCGGTGTTTGTCAGATTCAGAAAAAACATCCAGAAATGGTGATGTGAAACTGTTTGGGAAGATACTAACCAATCCATCATCCACCCAGAAGCCTAATTTAACTGCCAAGGGAAACTATGAAAATGGTACCCATAATCCAAAGTTAAGCAGCACCTCTTGTAGTCTGAAATTTACTGGGAATCATAATGCTGATGGAAGATCAGCAATTTTGAAGTTTGATCATAATGATTACTGGGGCATTGAAAATGTTCCCATCATGAGTTATTGGGATGGGAGCAGAATACAGTCTGGTTTCTCTTCACTGCCTGATTCTTCCATTTTGCTTGTGAAAAACCCTACTGCATTTAGTGATTATCCTACATCTTCCAAATTAGAGCAACAATCATTGCAGGCATCAGCCAAGAATGATGAACAGCACCTGAATGGAGCATCTGCTTTTACAACTAGGGAAGTCCATGGAAGCAATGGTATGATTGATTACCAAATGTTTAAAAATAGGGATGATCTGAAAGTGCAGCAGCCATTTATGGTAGATGTGAAGCAACGCCAAGATGCGTTCTCTGAGATGCAGAGAAGAAATGGTTTTGAAGCAATCTCAGGTTTACAGCAGCAGGGTAAGGGAATGGTGGGAATTAATGGTGTTGGGGGACCAGGTATTCTTGTGGGAGGATCACAAAGTGGAGTCTCGGATCCTGTGGCAGCCATCAAAATGCATTATTCCAATGCTGACCAGTGTGGCGGTCGGAATGGGAGTATCACGAGAGAGGATGAATCTTGGGGAGGTACTAATTTGACTGATGAAGAGATAAGATGGACTCACTTTGAGCAGATATTGGATAATTTGACATCTGGTTTTGCTTTCGTTTCCCTGGTTTGGGTTCATATAAATGTTAAAAAAGAATCGATGGTTTTTGCCTTGTATTTCGGCCATCTGAGCAGCAGCCTTTTGAGTGTGTATGATGGTGTTGGAGGGGAGGGCTTGGGGATGGCAATCTTGTTTTGTTGTGATCAAGATTTTGATTTGCCTCAAATTAAACCACCAAATTCTATGCTAAATCAGGAAATCCAATTCAACAAAAAGAAACTTAGTGAAGGAAAATGGAACGAAAAGCAAATAAAGGTGATGTAG 5370 0.4216 MIPWDRKDLLKERKHERSESLGSVPRWRDSSAHHGSSDFRPVAGHGKQGGWHLFPEESGNGHALSRSGDKMLEEDNGRPSVSQGDGKYGRSNRESRGSFSLRDWRGRSLETANGSVNLSWRQPDANNDQRSVDDMLTYSSHPHSDSVNTREQPLCKEQHDKMGGVNGYRESSLSSTEWKPLKWTRSGSLSLRGSGFGHSSSPRSIGGPDSCEGKAGLRHKIAAAVESNSGEAAACGTSASSEETNSRKKARLNWGEGLAKFEKKKVEGPDVSANKDGRVSSPIHMEPGNFLSTSLVEKSPKVSGFSDCASPSTPSSVAYNSSPAGVDDKLFGKAANVDNGVSNLSGSPGPGSQNHLQMLSFNLEKVDIGSLSSLGSSLVELLQSNDLNSLDSSPLRSTTMNKLLILKADISKVLEVTETEIDLLENELKSLKSESADRFPCSAAAGSLLVCYNAKSCAGHVGDSDKVARPEPLQIVSSDDPNVEKMPLSPNLHGIHDNGKEDDIDSPGTAISKFVEPPPLINIASSCDMRRHDTCSEYLDGIQSTSVKCLIPCTYRQVASVSACDDGNSSMEVKDGIDAKSGVKFYSSTKDKLYNTIISCNKESAKKACEVFAKLLPEGCGKIGNIGASSGSCSRDGAFIMEKFAEKKRFARFKERVITLKFKALHHKWKEDMRLLSIRKCRLKSPLELGLRTISNGHQKNRSSIRFRFPFPAGKQHSLIPTSEMINYTSQLLSESSNKIHRSTLKMPALILDQKEKMISKFLSRNGLVEDPLAIEKERAMINLWTSKEREIFLEKFAAFGKDFRKIASFLDHKTTADCVEFYYKNHKSDCFEKIKKKDGGKLGKFFTVKTGLMASDKKWNSKVNAASLEILSAASVMADGIAGNRKMRPGCSIWRGYADMETSRGEDCITERSSSLDILQDERETVAADVLAGICGSLSSEAMSSRITSSVDPVEGNRDRKRMKVRSLCKQPMVPDVAQCIDDETCSDESCGEMDSTEWTDGEKAAFLRAVSSFGNNFAMIAECIGTRSQNQCKVFFSKARKCLRLDLMHPRPENIGSLMNDDGNGGRSDTDDTCVVETSSVIGTDTSGTKTDEDLPSSVMNTYHESNPMEARDLSAVLNESKDINGEEVDHEDVNMVSNACVNKGESKLGTDGNRVVLCSSDKCGSIGDQRTIILSDSIEIGKDKPNVVGGAVTELVSALEIVEPCHSNSVAEDRLVSEVSSGCRGNELEGSPTCLVDSDDVHEADKDVVVEMKNKVYDSSSTVNTSLSSVGISCSILSFDAENHPQLCLDEKSHFSGSLEDAPTTANSILKNMAGTALQCEKTVSQDLLSSNCDFQGSRDISGHNSSSNGGCQLHNPGNQLDEASRTLQCYPLQAPVKEVNADMSCSSSATELPLLSQKFEQADDHYKTQLRCLSDSEKTSRNGDVKLFGKILTNPSSTQKPNLTAKGNYENGTHNPKLSSTSCSLKFTGNHNADGRSAILKFDHNDYWGIENVPIMSYWDGSRIQSGFSSLPDSSILLVKNPTAFSDYPTSSKLEQQSLQASAKNDEQHLNGASAFTTREVHGSNGMIDYQMFKNRDDLKVQQPFMVDVKQRQDAFSEMQRRNGFEAISGLQQQGKGMVGINGVGGPGILVGGSQSGVSDPVAAIKMHYSNADQCGGRNGSITREDESWGGTNLTDEEIRWTHFEQILDNLTSGFAFVSLVWVHINVKKESMVFALYFGHLSSSLLSVYDGVGGEGLGMAILFCCDQDFDLPQIKPPNSMLNQEIQFNKKKLSEGKWNEKQIKVM* 1790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02101 1789 MobiDBLite consensus disorder prediction 150 164 - -
Rops5g02101 1789 MobiDBLite consensus disorder prediction 110 149 - -
Rops5g02101 1789 SUPERFAMILY Homeodomain-like 768 828 IPR009057 -
Rops5g02101 1789 MobiDBLite consensus disorder prediction 1 177 - -
Rops5g02101 1789 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1000 1049 IPR017930 -
Rops5g02101 1789 MobiDBLite consensus disorder prediction 227 249 - -
Rops5g02101 1789 CDD SANT 999 1038 IPR001005 -
Rops5g02101 1789 Gene3D - 938 1055 - -
Rops5g02101 1789 ProSiteProfiles SANT domain profile. 785 831 IPR017884 -
Rops5g02101 1789 MobiDBLite consensus disorder prediction 89 103 - -
Rops5g02101 1789 MobiDBLite consensus disorder prediction 189 212 - -
Rops5g02101 1789 SUPERFAMILY Homeodomain-like 997 1046 IPR009057 -
Rops5g02101 1789 MobiDBLite consensus disorder prediction 189 206 - -
Rops5g02101 1789 Gene3D - 761 833 - -
Rops5g02101 1789 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 1674 - -
Rops5g02101 1789 ProSiteProfiles SANT domain profile. 997 1046 IPR017884 -
Rops5g02101 1789 SMART sant 996 1044 IPR001005 -
Rops5g02101 1789 SMART sant 781 829 IPR001005 -
Rops5g02101 1789 MobiDBLite consensus disorder prediction 1440 1459 - -
Rops5g02101 1789 MobiDBLite consensus disorder prediction 1 23 - -
Rops5g02101 1789 Pfam Myb-like DNA-binding domain 999 1039 IPR001005 -
Rops5g02101 1789 Coils Coil 407 434 - -
Rops5g02101 1789 MobiDBLite consensus disorder prediction 267 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02101 Rops-Chr5 45674184 45689785 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops5g02101 Myb_DNA-binding 1.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02101 - - gsj:114403608 2047.71