Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02095 ATGCAGCTCAGATTGTTGTTGTTTTGCATTTGGATATCAAGCCAGGACCCAGTGACTCTGCTAATTTCTCATTGCCACAACAGTCGTTGCATAAATGTCTTTTCCTTGGGTCATCAGCATATAACAATTTTAGATCTTGTACAAATCCTCAGTTTTGAGCTTGATAATATCAGGTTTCTTGGGACATCAGGTCAAAATGTATATGATCTTGAGAAGTATTCAGAGGCAAAAGATAAACTTGAATTCATGGAAAGGACATTAAGATGGAGGCATTTGGCACCCACTGCACCTAATACTTTTGGGTGTTATCCTTATACTGACAGGGATCCTTTCTTGACTGAGAGCTGTCCTCATGTGTACTTTATTGGCAATCGGGATAAATATGACACTCGTGTGAGAAAGGATCTCTGGAGATCCTTCAAAAGAGGTGGCGAGGTCTGTGAAGTTTTTATCCCCCAGAAGAGGAATATGTTTGGACAAAGATTTGGTTTTGTAAGGTTTCGAACAGAAGGTAATGAAGTATCTCTGGAAAAGTGGCTTAACAGGATTTGGTTTGGCTCTTTAAAGCTACGAGCCAATATTTCAAAATACAGACAAGAAAAAGTGCAGAATCAAGGTGGTAAGGTAGTTAGAGAACAGCAGTTTGTTAGAAAAAGTAACTCTATCAAGCAGATGGATCATCCTTACGCTGATGTTTTGATTGGCAACACCAAAAGAAGAGTGGAATATAGAGTGAAGGAGAAGAGCACTCAGATGAAGTCGAATGAGTGGACAGATGCTGAAGTGGAGCTGGGGTCACGTTTAACGTTGGCATGTAATAAAGTTCAGTGCGCTGAAACTATGCTTGTCGGGATAAAGCATCTGAACGTGGAACATCTATGCGTGGAACATCGAAGCATGGGACCTGATGTTATTAAAGAAGATTTTAGAAGGAATTTAGAAGAAGTGAAATCCGGTTATTTTGTTGAGTCTTGTCATACAGGGGATCAGTTGGTGAGTACTCCTTTTCATACAAAGGAGATCGTGCCTTTATTGGGCCAAGACGTGATTGGTGTCAATGTCCATTTGGACCAAGATTCGGTTAATAGGCCTGGCCCATTAGTGTGTCCAGTAAAGGTTTCGAGTGATTCTGATTCTTTTTCAAGCTCCTCAACGCATAATAAGCTGTTTTCCGAGGCAAGTAAGGCTGTTGATTTTGAGCTGGACTTGGGCCTGCGGGCCCAAACGAATATAGGGGTTCCTTTTGGTTCTAATCACCAGAATGTCTCTTTGGGATTGGCCGACTCCGGAAATGGAAGCTCTGCTTCTGTCACTTCGAAAAGTCCTAAATCTCATCCTAGGGCGCTCTCGTGCTTCAGGGGTCTTCCCCAACCAGAGAAGCCTTTTGATGGTTCAGAGCTTTCTAGTCGACCTTTATCAATCTTTCTTGAAGGAGCTGGGTCGTTGAGGAAGAAGAGTCATGGGGGTACAGAAGTTTTTCCATTTTTCAGCACTGTGACCAAAGGAAAGACGAAATCAAATGGTGTGATCAGGAAGAATTTTTCTCTTAACAGTGTTGCCGAGGAGGCCAACATAGGAAGTATTATGTCCAGTTCAAGAGAGATCCAGATTACACCATACTTCTCTTGCATATATTCAAAGGAAGCTCCAGACTACGTTCAGGAAGAGTGTTCATCCTAG 1680 0.4214 MQLRLLLFCIWISSQDPVTLLISHCHNSRCINVFSLGHQHITILDLVQILSFELDNIRFLGTSGQNVYDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTFGCYPYTDRDPFLTESCPHVYFIGNRDKYDTRVRKDLWRSFKRGGEVCEVFIPQKRNMFGQRFGFVRFRTEGNEVSLEKWLNRIWFGSLKLRANISKYRQEKVQNQGGKVVREQQFVRKSNSIKQMDHPYADVLIGNTKRRVEYRVKEKSTQMKSNEWTDAEVELGSRLTLACNKVQCAETMLVGIKHLNVEHLCVEHRSMGPDVIKEDFRRNLEEVKSGYFVESCHTGDQLVSTPFHTKEIVPLLGQDVIGVNVHLDQDSVNRPGPLVCPVKVSSDSDSFSSSSTHNKLFSEASKAVDFELDLGLRAQTNIGVPFGSNHQNVSLGLADSGNGSSASVTSKSPKSHPRALSCFRGLPQPEKPFDGSELSSRPLSIFLEGAGSLRKKSHGGTEVFPFFSTVTKGKTKSNGVIRKNFSLNSVAEEANIGSIMSSSREIQITPYFSCIYSKEAPDYVQEECSS* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02095 559 MobiDBLite consensus disorder prediction 424 455 - -
Rops5g02095 559 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 51 147 IPR024826 -
Rops5g02095 559 MobiDBLite consensus disorder prediction 424 445 - -
Rops5g02095 559 SUPERFAMILY RNA-binding domain, RBD 118 199 IPR035979 GO:0003676
Rops5g02095 559 Pfam DNA polymerase alpha/epsilon subunit B 51 125 IPR007185 GO:0003677|GO:0006260
Rops5g02095 559 Gene3D - 50 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02095 Rops-Chr5 45360373 45373278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02095 10 134 Core DNA Replication Machinery Family AT2G42120 59.200 3.22e-43 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02095 K02328 - vvi:100241865 164.081