Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02079 ATGGCTTCCAACACATTGATGAGCTCTGCTGTCTCAGCTTTCCCATCTCTTCTTTCTTCCTCAAAATCCAGATTTGCCACTGCAGTTCCACTTTCCTGCTTTGGTTCCAATGCTTCTGCTCGCTTCACTATGACTGCTGACTGGATGCCAGGCCAGCCTAGACCCCCTTACCTTGATGGCTCAGCTCCTGCTGACTTTGGATTCGACCCTCTTCGTCTTGGTGAAGTACCAGAGAATCTTGAGAGATTCAAAGAGTCAGAAGTCTATCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCAGAGGCATTGGGATTAGGCAACTGGGTAAAAGCTCAAGAATGGGCAGCAATTCCTGGTGGCCAAGCCACCTACCTAGGCAACCCTGTTCCATGGGGCACCCTCCCAACCATTTTGGTCATTGAATTCCTTGCTATTGCATTTGTGGAGCACCAAAGGAGCATGGAGAAAGACACAGAGAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCTAAGGACCCTAAAAAGTTCCATGAATACAAAATCAAAGAAATTAAGAATGGACGTCTTGCTATGTTGGCTTTTGTGGGGTTCTGTGTTCAACAATCAGCTTACCCTGGCACTGGACCTTTGGAGAACTTGGCTACTCACTTGGCTGATCCATGGCACAACAACATTGGAAGTATCATTATTCCCCAATAG 723 0.4716 MASNTLMSSAVSAFPSLLSSSKSRFATAVPLSCFGSNASARFTMTADWMPGQPRPPYLDGSAPADFGFDPLRLGEVPENLERFKESEVYHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGNPVPWGTLPTILVIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSKDPKKFHEYKIKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGSIIIPQ* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02079 240 FunFam Chlorophyll a-b binding protein, chloroplastic 49 235 - -
Rops5g02079 240 Gene3D Chlorophyll a/b binding protein domain 49 235 - -
Rops5g02079 240 Pfam Chlorophyll A-B binding protein 55 209 IPR022796 -
Rops5g02079 240 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 44 236 IPR001344 GO:0009765|GO:0016020
Rops5g02079 240 SUPERFAMILY Chlorophyll a-b binding protein 38 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02079 Rops-Chr5 44537335 44539264 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02079 1 196 Chloroplast and Mitochondria Gene Families AT3G54890 79.798 3.23e-105 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02079 K08907 - gmx:100305992 442.965