Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02075 ATGGAGATGAACATGGCTGAGCATTCTGACAGTTTCGCTCGCAAAGACGAGGACAACATCGCCGGCGAATCTCCTCACTCACCGTTGCCGGAGACTGCAGATAACGTTGATCCCAAACCGGACAGCGAAACCGAAAAAGCTCCAAATGCAGATCATATTGAGGGAGAAACGGAAAAGGAGGAGGAGAAGGACGAGGTGGAGGAGGAGGACGTAGCGGTGGAGTTTCCGCCGGAAAATCCTCCTCCAAGCCTTGAAAAGGTTTCAGAAGACATCGATCAATTCCTTGAGACAACGCAGCAGCAGAATAAGAACAATGCAAATTCCAAAGAAACCTCATTAGAGATCCCTGATTTCATCGAGAGGTTCTCAGATCTCGTGGAAGAGAAGATCACAAGATACGACACAGGCGAAACCAAATGGGGCGAGGCAATGGAAGAAGATTCATCATTGCTTGAATCTGTGAATCGCATTTCAAAGCTGATGAAAACGTTGACCACAGAGTCTCAATCTCAATCTCAATCCAACGAAGAAGAAACAGAGGAAGAGATCTTTAACAGGAAAAAAAGGGACTTGTTTGTTAATCGCATCGGCGCCATTCAACAACGAGCGATGTCGTATTTGGAGGAAGAGTTCCGGTTGTTAATGGAAGAATCAAGAAACAATAACAAATCAGAACCCGACCCGAAAGGGAAACACGTGGCGGAACCGTCGGATTCAGAAACCGTTGAGACGGTTACCGATTTCCCGGGTTTTCCGGAGGAGACAGTTACGAATTTGAACAAGATAGCTCGGGAGATGATATTGGGTGGTTACCAATCTGAATGTTCCCAGGTTTACGCTCTTTCCAGAAGGCACACGATTGAAGATGGCTTGAACAAGTTGTTAGGGTACGAGAAAATCAGCATCGACGAGACTCAGAGAATGCAATGGGAAGCATTGGAAAGAGAGATCCCAACGTGGATCAACACGTTCAAGGAATGCTCCGCCGTGTGGTTCCCCAGCGAGAGGAAACTCGCGGAGTCGGTGTTCACTGAGAACCCGCCGGTGGCCGCGAATATCTACGGAAACCTCGCCCGCGGAATTATGATTCAGCTTCTCAATTTCGCTGAGAGCGTGGCAATGACAAAGCGTGCTAGTCAGAAACTTTTCAAACTTCTTGACATGTACGAGACCTTGAGGGATTCAATCCCAAATGTAGAAAGTCTCTTCCCGGAGGAATTCTCCGGCGAGCTCAAGTCCGAAACAACATCGGCGAAGTGCAGACTCGGAGAAGCCGCGGTGCTTATATTCTGCGATCTCGAAAACTCGATCAAATCTGACACCGGAAAAACTCCGGTTGCCGGTGGCGCGGTTCATCCTCTAACACGCTACATCATGAACTACCTGACACTCGCGTCCGAGTATAAAGACACATTGGAAGAGGTTTTCAGGGAACATTCAAAGATCGAGCGTGCAGATTCAACTAGTAGACCACGTTATGAAGAGGAGAGCCAAAACGACAACAAGCAAAGGATAACAACAGAAAAGGAAAACGCATCGCCGTTTGCAGCGCAGTTAATGAGGGTGATGGAGTTGCTTGACTCGTATCTTGAAGGAAAGGCTAAGCTGTATAAAGAGGTTGCACTAAGCTGCATTTTCATGATGAACAATGGGAGATACATTGTTCAAAAAATCAAAGGCTCTGCTGAGATTTATAAGGTGATGGGTCAAACATGGTGCAGGAAAAGATCAACAGAACTTAGGACTTACCACAAGAACTACCAGATAGAAACATGGAGCAAGATACTTAGTTGCCTTAGCCCTAAAGGGTTGAATGATAATGGGAAGGTGCAGAAGCCAGTGCTGAAGGAGAGGTTCAAGAGTTTCAATGCTTTGTTTGAGGAGATACATAAGACTCAAAGCACGTGGGTGGTGAGTGATGAACAGCTTCAATCAGAACTGAGGGTTTCCATTTCTGCGCTTGTGATTCCAGCTTACAGGTCATTCTTGGGAAGGTTTTCGCAGTATTTGGACCCAGGGAGACAAACTGAAAAGTACATTAAGTTCCAGGCTGAGGATATAGAGACTTATATTGATGAGTTGTTTGATGGGAACCCTCACCATCAAGCCATGGCTAGAAAGAAAGCATGA 2130 0.4643 MEMNMAEHSDSFARKDEDNIAGESPHSPLPETADNVDPKPDSETEKAPNADHIEGETEKEEEKDEVEEEDVAVEFPPENPPPSLEKVSEDIDQFLETTQQQNKNNANSKETSLEIPDFIERFSDLVEEKITRYDTGETKWGEAMEEDSSLLESVNRISKLMKTLTTESQSQSQSNEEETEEEIFNRKKRDLFVNRIGAIQQRAMSYLEEEFRLLMEESRNNNKSEPDPKGKHVAEPSDSETVETVTDFPGFPEETVTNLNKIAREMILGGYQSECSQVYALSRRHTIEDGLNKLLGYEKISIDETQRMQWEALEREIPTWINTFKECSAVWFPSERKLAESVFTENPPVAANIYGNLARGIMIQLLNFAESVAMTKRASQKLFKLLDMYETLRDSIPNVESLFPEEFSGELKSETTSAKCRLGEAAVLIFCDLENSIKSDTGKTPVAGGAVHPLTRYIMNYLTLASEYKDTLEEVFREHSKIERADSTSRPRYEEESQNDNKQRITTEKENASPFAAQLMRVMELLDSYLEGKAKLYKEVALSCIFMMNNGRYIVQKIKGSAEIYKVMGQTWCRKRSTELRTYHKNYQIETWSKILSCLSPKGLNDNGKVQKPVLKERFKSFNALFEEIHKTQSTWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTEKYIKFQAEDIETYIDELFDGNPHHQAMARKKA* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02075 709 MobiDBLite consensus disorder prediction 36 59 - -
Rops5g02075 709 MobiDBLite consensus disorder prediction 1 22 - -
Rops5g02075 709 MobiDBLite consensus disorder prediction 93 112 - -
Rops5g02075 709 Pfam Exo70 exocyst complex subunit 320 693 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops5g02075 709 MobiDBLite consensus disorder prediction 218 245 - -
Rops5g02075 709 MobiDBLite consensus disorder prediction 483 509 - -
Rops5g02075 709 SUPERFAMILY Cullin repeat-like 146 696 IPR016159 -
Rops5g02075 709 PANTHER EXOCYST COMPLEX PROTEIN EXO70 114 697 IPR004140 GO:0000145|GO:0006887
Rops5g02075 709 FunFam Exocyst subunit Exo70 family protein 134 703 - -
Rops5g02075 709 MobiDBLite consensus disorder prediction 164 183 - -
Rops5g02075 709 MobiDBLite consensus disorder prediction 218 238 - -
Rops5g02075 709 MobiDBLite consensus disorder prediction 483 507 - -
Rops5g02075 709 MobiDBLite consensus disorder prediction 1 112 - -
Rops5g02075 709 Gene3D Exocyst complex component Exo70 124 704 - -
Rops5g02075 709 MobiDBLite consensus disorder prediction 60 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02075 Rops-Chr5 44500680 44503115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02075 34 709 EXO70 exocyst subunit family AT5G13990 49.787 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02075 K07195 - gmx:100819960 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02349 8 54411249 54413539 Rops5g02075 5 44500680 44503115 PCT