Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02070 ATGGCAACCAGATACTGGGTAGTTTCTCTTCCCGTTCAAAATTCCGCATCCACTCTCTGGAACCAATTGCAGGATCGAATCTCCAAACATTCCTTTGACACTCCTCTTTACAGATTCAACATTCCCAATCTCCGCGTCGGAACGTTAGATTCGCTCCTTTCTCTCAGCGATGATCTCGTCAAGTCGAACAATTTCATGGAGGGAGTGTCGCAGAAGATCAGGCGGCAGATTGAGGAATTGGAGAGAGCGTCGGGCGTGATGAGCAGTGGGCTAACGGTGGATGGGGTTCCTGTTGATTCGTACTTGACGAGGTTTGTTTGGGATGAAGCAAAGTACCCGACTATGTCACCTTTGAAGGAGATCGTGGATGGGATTCATGGTCAGGTGGCAAAGATTGAGGATGATCTCAAGGTTCGTGTTTCTGAGTTTAACAATATCCGCAGTCAGCTTAATGCCATCAACAGAAAGCAAAGTGGAAGCTTAGCTGTCCGTGATCTTTCCAACTTGGTAAAACCTGAGGATATTGTAACTTCTGAACATTTAACTACCCTTCTAGCAATTGTTCCCAAGTATTCACAGAAGGATTGGCTCTCAAGCTATGAAACATTGACAAGCTATGTGGTCCCCAGGTCTTCCAAGAAGTTGTATGAGGATAATGATTATGCTCTTTATACCGTAACACTCTTCAGTCGTGTTGCAGACAATTTTAGAACTAGTGCACGGGAAAAGGGGTTCCAAATTCGAGATTTTGAACACAGTCCAGAATCACACGAGAGTCTGAAGCAGGAATTAGAGAAATTGATGCAAGACCAGGAAAGTTTGAGGGGTTCTCTATTGCAATGGTGTTATGCTAGTTATGGAGAGGTTTTCAGCTCTTGGATGCACTTTTGTGCTGTACGCCTATTTACTGAAAGCATTCTGAGATATGGTCTTCCACCATCTTTCTTGGCATGTGTTTTAGCTCCATCGGTCAAAGCTGAGAAGAAAGTACGTTCAATCCTTGAAGGCCTGAGTGATACTGCAAACAGTGCATACTGGAAGACCGAGGAGAATGATGTGGGAGTTGGGATGGCTGGCCTAGCAGGTGATGCTGATACCCACCCTTATGTCTCCTTCACCATCAATCTTGTTTGA 1134 0.4497 MATRYWVVSLPVQNSASTLWNQLQDRISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLVKSNNFMEGVSQKIRRQIEELERASGVMSSGLTVDGVPVDSYLTRFVWDEAKYPTMSPLKEIVDGIHGQVAKIEDDLKVRVSEFNNIRSQLNAINRKQSGSLAVRDLSNLVKPEDIVTSEHLTTLLAIVPKYSQKDWLSSYETLTSYVVPRSSKKLYEDNDYALYTVTLFSRVADNFRTSAREKGFQIRDFEHSPESHESLKQELEKLMQDQESLRGSLLQWCYASYGEVFSSWMHFCAVRLFTESILRYGLPPSFLACVLAPSVKAEKKVRSILEGLSDTANSAYWKTEENDVGVGMAGLAGDADTHPYVSFTINLV* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02070 377 CDD V-ATPase_C 5 374 IPR004907 GO:0033180|GO:0046961|GO:1902600
Rops5g02070 377 Gene3D Vacuolar atp synthase subunit c; domain 1 5 334 - -
Rops5g02070 377 Pfam V-ATPase subunit C 5 370 IPR004907 GO:0033180|GO:0046961|GO:1902600
Rops5g02070 377 Coils Coil 63 83 - -
Rops5g02070 377 SUPERFAMILY Vacuolar ATP synthase subunit C 1 376 IPR036132 GO:0015078|GO:0033180|GO:1902600
Rops5g02070 377 Coils Coil 257 277 - -
Rops5g02070 377 Gene3D - 41 312 - -
Rops5g02070 377 FunFam V-type proton ATPase subunit C 163 251 - -
Rops5g02070 377 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 2 376 IPR004907 GO:0033180|GO:0046961|GO:1902600
Rops5g02070 377 Gene3D - 163 251 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02070 1 376 Primary Pumps ATPases(2) AT1G12840 82.447 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02070 K02148 - gmx:100803728 685.256