Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02069 ATGGCAATTTCAGATAACTCGAGCCACCATTCTTTGATCCCAAGTTTCTTGTACTTCTCTTCTTCACCACAGAAGAAGAAGATGGTTGAGTCCACCAATTCTTCGAGGTTGATGATTCCTGCTCCGAGTGAGCCTGGTGGTGGTGGTGGTGGCAATATTCAGATGTACTCGCCAGCCTTCTATGCTGCTTGTGCCGTTGGTGGAAGCCTCTGTTGTGGACCCACTCATATGGCTGTTACACCTCTTGACCTTGTCAAATGTAATATGCAGATTGACCCTGCAAAGTACAAGAGCATCTCCTCTGGATTTGGAATTATGCTTAAGGAGCAAGGACTCAGGGGCTTTTTCCGGGGATGGGCACCAACATTTCTTGGTTACAGTGCACAGGGTGCATTCAAATATGGACTCTATGAGGTCTTTAAAAAGTACTATTCTGACATTGCTGGCCCAGAATATGCAACCAAGTATAAGACATTGATCTACCTCGCTGGTTCAGCATCTGCTGAGATTATTGCAGATGTTGCACTTTGCCCATTTGAGGCAGTGAAGGTCAGAGTTCAAACTCAACCTGGCTTTGCTAGAGGCCTTGCTGATGGGCTACCAAAATTGGTCAAAACTGAAGGAGCATTGGGGTTGTACAAGGGAATTGTGCCTCTCTGGGGAAGACAGGTTCCATATACAATGATGAAGTTCTCTTCTTTTGAGAACATTATTGAGTTGATGTATAAGCATGTCATCCCCACACCAAAGGATGATTGCAGCAAAACCCTGCAACTTGGTGTGAGTGTTGCCAGTGGATACATGGCTGGTATATTATGTGCAGTTGTTTCTCATCCTGCTGATAACCTAGTCTCTTTCCTCAACAATTCCAAAGGGGCAACGGTTGGCGACGCTGTGAAGAATCTTGGATTATGGGGTCTGTTCACCCGTGGTCTCCCTCTCCGTATTCTTATGGTTGGAACTCTTACTGGAGCTCAATGGGGAATTTATGATGCATTCAAAGTTTTTGTGGGATTGCCAACCACTGGTGGTGTTGCTCCTGCTGCTGTTCCTGTTCCAGCTTCTGCTACTTAG 1074 0.459 MAISDNSSHHSLIPSFLYFSSSPQKKKMVESTNSSRLMIPAPSEPGGGGGGNIQMYSPAFYAACAVGGSLCCGPTHMAVTPLDLVKCNMQIDPAKYKSISSGFGIMLKEQGLRGFFRGWAPTFLGYSAQGAFKYGLYEVFKKYYSDIAGPEYATKYKTLIYLAGSASAEIIADVALCPFEAVKVRVQTQPGFARGLADGLPKLVKTEGALGLYKGIVPLWGRQVPYTMMKFSSFENIIELMYKHVIPTPKDDCSKTLQLGVSVASGYMAGILCAVVSHPADNLVSFLNNSKGATVGDAVKNLGLWGLFTRGLPLRILMVGTLTGAQWGIYDAFKVFVGLPTTGGVAPAAVPVPASAT* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02069 357 FunFam Phosphate carrier protein, mitochondrial 59 337 - -
Rops5g02069 357 Gene3D Mitochondrial carrier domain 60 337 IPR023395 -
Rops5g02069 357 Pfam Mitochondrial carrier protein 159 244 IPR018108 -
Rops5g02069 357 Pfam Mitochondrial carrier protein 61 145 IPR018108 -
Rops5g02069 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 156 240 IPR018108 -
Rops5g02069 357 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 30 347 IPR044677 GO:0005315|GO:1990547
Rops5g02069 357 SUPERFAMILY Mitochondrial carrier 61 332 IPR023395 -
Rops5g02069 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 59 143 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02069 Rops-Chr5 44416278 44420928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02069 6 348 Chloroplast and Mitochondria Gene Families AT5G14040 70.380 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02069 K15102 - gmx:100804257 545.043