Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02067 ATGCGAGAAGCAGAAGGTGAAAAGTCCCCTATAACTTCCATGATCAAGCTCCACTGTTTGCATGAGCTTCTCGTGTCGGAGATGCTAAGAAGGACCAACAACTTCGTGGGAGAGAGCCACGACAACAAATACTGGACTGGATGGGCTGTGGAGGACGTCGAGGATAAGGAAAATGCACTTTTCACCACCCCTCCTGAGCTAGCTTATGTTGAATTTGGTTCCCCTCCAACATTTCCTCCTAACCTGACACTCCAATTCGATGTCGAGTTGCTGTCTTGGACTAGTGTGAAGGACATTTGTAAGGATGGTGGTATATTTAAGAAGATATCTGCTGAGGGGGAGAAATGGGAGAGCCCCAAGGATCCTGATGAAGTATTGGTTAAGTATGAGGTTCGTCTGGAAGATGGAAAGCTTGTAGCAAAGTCTGATGGAGTGGAGTTCACTGTCAGAGAGAGTCATTATCGTCCTGCATTATCTACGGCTGTTAAGACCATGAAGAAAGGGGAGAAAGTTATTTTGACAATAAAGCCACAATATGGATTTGGTGAAAAAGGAAAGCCAGCGCATGGCGATGAACGTGCAGCTCCAAAACGCACACAACAAGGACTGCTGTAG 615 0.4618 MREAEGEKSPITSMIKLHCLHELLVSEMLRRTNNFVGESHDNKYWTGWAVEDVEDKENALFTTPPELAYVEFGSPPTFPPNLTLQFDVELLSWTSVKDICKDGGIFKKISAEGEKWESPKDPDEVLVKYEVRLEDGKLVAKSDGVEFTVRESHYRPALSTAVKTMKKGEKVILTIKPQYGFGEKGKPAHGDERAAPKRTQQGLL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02067 204 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 117 187 IPR001179 GO:0003755
Rops5g02067 204 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 49 91 IPR001179 GO:0003755
Rops5g02067 204 Gene3D - 98 200 IPR046357 GO:0003755
Rops5g02067 204 SUPERFAMILY FKBP-like 98 188 - -
Rops5g02067 204 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 50 100 - -
Rops5g02067 204 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 122 204 IPR001179 GO:0003755
Rops5g02067 204 MobiDBLite consensus disorder prediction 181 204 - -
Rops5g02067 204 SUPERFAMILY FKBP-like 51 109 - -
Rops5g02067 204 Gene3D - 2 97 IPR046357 GO:0003755
Rops5g02067 204 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 47 94 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02067 Rops-Chr5 44282878 44284558 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02067 47 196 Calmodulin-binding Proteins AT3G25230 70.395 3.84e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02067 K09571 - gmx:100812632 250.751